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pyMin_v1.py
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pyMin_v1.py
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"""
Created on Mar 28, 2019
first stable version April 17 2019
@author: miki
"""
# SYSTEM
import os
import sys
from tkinter import *
from tkinter import filedialog
from tkinter import scrolledtext
import PySimpleGUI as sg
import openpyxl
import pandas as pd
import seaborn as sns
from matplotlib import pyplot as plt
# from matplotlib import interactive
# from pathlib import Path
#from pandasgui import show
# SPECIFIC
from mincalclib import mineral_constants, dataset, conversion
from mincalclib.mainMenu import Example
# from mincalclib.conversion import exportAX
# import treeviewMinLabels
'''
https://pypi.org/project/PySimpleGUI/
https://pysimplegui.readthedocs.io/tutorial/
https://opensource.com/article/18/8/pysimplegui
'''
print(sys.version)
print(sys.version_info)
class pyMin:
version = '3.2'
def __init__(self):
self.version
def main():
# START using GUI or batch
# python pyMin_old.py (GUI mode)
# python pyMin_old.py inuptfile.xlsx (batch mode)
# df>> data in formato PANDAS
# usati per plot ma forse utili per rielaborazioni
# ad esempio fare export AX o EXCEL
if len(sys.argv) >= 2:
inputfile = sys.argv[1]
#print('file exists')
print()
batch_calc_from_file(inputfile)
exit(0) # Successful exit
# quit()
else:
print('start GUI')
# print("pyMin_old.py path using --> print(os.path.dirname(os.path.realpath(__file__))):\n")
# print(os.path.dirname(os.path.realpath(__file__)))
print("\n")
# print("pyMin_old.py path using --> print(os.path.dirname(os.path.realpath(sys.argv[0])))\n")
print("file folder: ", os.path.dirname(os.path.realpath(sys.argv[0])))
filewd = os.path.dirname(os.path.realpath(sys.argv[0]))
# =======GUI========================================================
# MAIN WINDOW
root = Tk()
root.geometry("370x520+400+30");
# root.title("pyMin v.3 - Michele Zucali 2019")
# label_root=Label(root, text="Mineral Formula Calculation \n\n [email protected]\n\n\n "
# "The Houston Rockets version - Nov-Dec 2019 \n\n\n\n\n\n\n")
# root.title("pyMin v.3 - Michele Zucali 2021")
# label_root = Label(root, text="Mineral Formula Calculation \n\n [email protected]\n\n\n "
# "The Vaccine Version - Jan 2021 \n\n\n\n\n\n\n")
# root.title("pyMin v.3.1 - Michele Zucali 2021")
# label_root = Label(root, text="Mineral Formula Calculation \n\n [email protected]\n\n\n "
# "The Lyon Version - Nov 2021 \n\n\n\n\n\n\n")
label_root = Label(root, text="Mineral Formula Calculation \n\n [email protected]\n\n\n "
"The Vertical Version - Dec 2022 \n\n pyMin v.3.2 - Michele Zucali 2022\n\n\n\n\n")
label_root.pack()
app = Example()
# Mineral labels and oxigens WINDOW
label_window = Toplevel(root)
label_window.geometry('370x600+30+30')
display_mineral = Label(label_window,
text="Mineral Labels and Oxigens!")
display_mineral.pack()
Lb_mineral = Listbox(label_window, height=33)
for k in sorted(mineral_constants.mineral_oxigens.keys()):
Lb_mineral.insert(END, (k, '->', mineral_constants.mineral_oxigens[k]))
Lb_mineral.pack()
# OUTPUT TERMINAL WINDOW
output_display = Toplevel(root)
output_display.geometry('740x400+800+30')
label = Label(output_display, text="Output Terminal")
label.pack()
text = scrolledtext.ScrolledText(output_display)
text.pack()
text.insert(END, "Ready to RUN\n\n")
root.filename = ''
fileOUT = ''
def UploadAction(event=None):
root.filename = filedialog.askopenfilename(initialdir=os.getcwd(), title="Select mineral oxides input file",
filetypes=[("TXT files", "*.txt"), ("TAB files", "*.tab"),
("CSV files", "*.csv"), ("excel files", "*.xlsx"),
("excel files", "*.xls")])
print('Selected root.filename:', root.filename)
text.insert(END, ('Selected root.filename:', root.filename))
# return root.filename
saved = sys.stdout
fout = open("pyMinCalc.log", 'w')
sys.stdout = writer(sys.stdout, fout)
print("main in pyMin development")
pyPTinst = pyMin()
print("pyMin version....", format(pyPTinst.version))
print("LOGFILE for pyMinCalc")
print("pyMinCalc.log")
global ds
ds = dataset.dataset(root.filename)# RUN dataset.dataset sul filename INPUT
# data_pd = pd.read_excel(root.filename, engine='openpyxl')
global fileOUT
fileOUT=ds.return_fileout()
text.insert(END, "\nfinishing\n")
text.insert(END, "\ntask completed\n")
text.insert(END, "\nsaved to file _OUT and logfile\n")
print("finishing")
print("executed")
sys.stdout = saved
fout.close()
print("\n")
def plotDataPandasGUI(): #https://github.com/adamerose/pandasgui
root.filename = filedialog.askopenfilename(initialdir=os.getcwd(), title="Select mineral oxides input file",
filetypes=[("TXT files", "*.txt"), ("TAB files", "*.tab"),
("CSV files", "*.csv"), ("excel files", "*.xlsx"),
("excel files", "*.xls")])
print("plot")
df = pd.read_excel(root.filename, sheet_name='APPEND', engine='openpyxl')
# show(df)
def plotDataScatter():# (event=None):
root.filename = filedialog.askopenfilename(initialdir=os.getcwd(), title="Select mineral oxides input file",
filetypes=[("TXT files", "*.txt"), ("TAB files", "*.tab"),
("CSV files", "*.csv"), ("excel files", "*.xlsx"),
("excel files", "*.xls")])
print("plot")
df = pd.read_excel(root.filename, sheet_name='APPEND', engine='openpyxl')
print("to list")
print(df.columns.tolist())
# df1 = df[['SiO2', 'Al2O3', 'FeO', 'MgO', 'mineral']]
# df2 = df[['SiO2', 'Na2O', 'CaO', 'K2O', 'mineral']]
#fig, axes = plt.subplots(figsize=(10,5),ncols=1,nrows=1)
#fig.suptitle('DATA PLOTS')
# fig1 = sns.figure()
#plt.figure(1)
#sns.pairplot(df1, hue="mineral",height=1.5)
plt.figure(2)
sns.scatterplot(data=df, x='SiO2', y='OxSum', hue="mineral")
#print(plt.get_current_fig_manager())
# mngr.window.setGeometry(50,100,640,545)
# mngr.window.setGeometry()
# fig.canvas.manager.window.Move(100, 400)
#print("plot figure 1 pairplot")
#plt.figure(1).show()# 2 novembre 21
#plt.figure(2).show()# 2 novembre 21
#print("plot figure 2 FacetGrid")
#sea = sns.FacetGrid(df, col="mineral", hue="mineral")
#sea.map(sns.scatterplot, "OxSum", "SiO2", alpha=.8)
#sea.add_legend()
plt.figure(2).show()
def plotDataMatrix():# (event=None):
root.filename = filedialog.askopenfilename(initialdir=os.getcwd(), title="Select mineral oxides input file",
filetypes=[("TXT files", "*.txt"), ("TAB files", "*.tab"),
("CSV files", "*.csv"), ("excel files", "*.xlsx"),
("excel files", "*.xls")])
print("plot")
df = pd.read_excel(root.filename, sheet_name='APPEND', engine='openpyxl')
print("to list")
print(df.columns.tolist())
df1 = df[['SiO2', 'Al2O3', 'FeO', 'MgO', 'mineral']]
# df2 = df[['SiO2', 'Na2O', 'CaO', 'K2O', 'mineral']]
#fig, axes = plt.subplots(figsize=(10,5),ncols=1,nrows=1)
#fig.suptitle('DATA PLOTS')
# fig1 = sns.figure()
plt.figure(1)
sns.pairplot(df1, hue="mineral",height=1.5)
#plt.figure(2)
#sns.scatterplot(df, x="SiO2", y="OxSum", hue="mineral",height=1.4, aspect=1/1)
#print(plt.get_current_fig_manager())
# mngr.window.setGeometry(50,100,640,545)
# mngr.window.setGeometry()
# fig.canvas.manager.window.Move(100, 400)
#print("plot figure 1 pairplot")
#plt.figure(1).show()# 2 novembre 21
#plt.figure(2).show()# 2 novembre 21
#print("plot figure 2 FacetGrid")
#sea = sns.FacetGrid(df, col="mineral", hue="mineral")
#sea.map(sns.scatterplot, "OxSum", "SiO2", alpha=.8)
#sea.add_legend()
plt.figure(2).show()
####### FINE PLOT DATA
def convertAX(event=None):
print("convert to AX fomatted file")
# print(fileOUT)
# global ds
# global fileOUT
fileOUT = ds.return_fileout()
df = pd.read_excel(fileOUT, sheet_name='APPEND', engine='openpyxl')
convert = conversion.conversioni
convert.exportAX(df)
# convert.exportAX(df)
# exportAX(df)
###############BUTTONS
Button(root, text="Select the File & Run", command=UploadAction).pack()
Button(root).pack()
Button(root).pack()
Button(root, text="Plot Data Results", fg='blue', activebackground='#00ff00',
command=plotDataPandasGUI).pack()
Button(root).pack()
Button(root, text="Plot Data Results", fg='blue', activebackground='#00ff00',
command=plotDataMatrix).pack()
Button(root, text="convert AX", fg='blue', activebackground='#00ff00', command=convertAX).pack()
Button(root).pack()
Button(root, text="Exit", command=root.destroy).pack()
root.mainloop()
##### BACK TO TERMINAL-CONSOLE
print("LIST OF LABELS and associated OXYDES\n")
for k, v in mineral_constants.mineral_oxigens.items():
print(k, v)
######## SALVA SU XLSX elenco labels per minerali
workbookNew = openpyxl.Workbook()
# workbookNew = xlsxwriter.Workbook(root.filename + '_labelsMIN.xlsx')
worksheetNEW = workbookNew.worksheets[0]
worksheetNEW.title = "label"
# worksheetNEW.name["label"]
row = 0
col = 1
for key, value in mineral_constants.mineral_labels.items():
row += 1
# print("key, value in mineral_constants.mineral_labels.items()")
# print(key, value)
worksheetNEW.cell(row, col).value = key
# for item in mineral_constants.mineral_labels[key]:
worksheetNEW.cell(row, col + 1).value = value
# row += 1
workbookNew.save(root.filename + '_labelsMIN.xlsx')
workbookNew.close()
##############
print("system closing")
sys.exit(0)
#
# TO BE implemented:
# 1) cation partitioning
# 2) AX export and reformat for EXCEL spreadsheets
# 3) √ save each mineral
# 4) SD
# 5) thermobarometry?
# 6) √ plot √
# 7) √ remove spaces headers if any==> inoutfile.py==> line 90 in def readFILE_E_ESTRAI_DATI_MA_CONTROLLA_MINLABEL_SET_OX(file_Input_XLSX): headers.append(str(s.cell(riga,colo).value).strip())
class writer:
def __init__(self, *writers):
self.writers = writers
def write(self, text):
for w in self.writers:
w.write(text)
def windowsss():
# import PySimpleGUI as sg
layout = [[sg.Text('Persistent window')],
[sg.Input(do_not_clear=True)],
[sg.Button('Read'), sg.Exit()]]
window = sg.Window('Window that stays open', layout)
while True:
event, values = window.Read()
if event is None or event == 'Exit':
break
print(event, values)
window.Close()
def batch_calc_from_file(infile):
saved = sys.stdout
fout = open("pyMinCalc.log", 'w')
sys.stdout = writer(sys.stdout, fout)
print("main in pyMin development")
pyPTinst = pyMin()
print("pyMin version....", format(pyPTinst.version))
print("LOGFILE for pyMinCalc")
print("pyMinCalc.log")
print("RUNNING batch scripting from batch_calc_from_file()")
dataset.dataset(infile)
# processedFile = open('pyMinCalc.log', 'r')
# ttk.Label(Tab4, text=[processedFile.read()]).place(x=0, y=27)
# text1 = processedFile.read()
workbookNew = openpyxl.Workbook(infile + '_labelsMIN.xlsx')
# workbookNew = xlsxwriter.Workbook(infile + '_labelsMIN.xlsx')
worksheetNEW = workbookNew.add_worksheet()
row = 0
col = 0
for key, value in mineral_constants.mineral_labels.items():
row += 1
worksheetNEW.write(row, col, key)
# for item in mineral_constants.mineral_labels[key]:
worksheetNEW.write(row, col + 1, value)
# row += 1
workbookNew.close()
print("finishing")
print("executed")
sys.stdout = saved
fout.close()
print("\n")
if __name__ == '__main__':
main()