You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
First of all, thank you for creating this library. It has been extremely useful, and the documentation is excellent.
I am encountering an issue with the get_skeletons function. According to the documentation, this function should work for proofread root IDs 630 and 783. To ensure the neuron IDs are up-to-date, I use the is_latest_root function. Here is the relevant code snippet:
Based on this, I assumed I could use the get_skeletons function for both IDs. However, while the function works for the first ID, it fails for the second one. Here is the code and error message:
flywire.get_skeletons fetches skeletons that we precomputed for neurons that were already proofread at materialization 783 or 630 neurons, i.e. neurons that are part of the two public releases.
The root Id 720575940507344965 is not proofread and at closer inspection appears to be just a tiny fragment:
flywire.get_skeletons does not check if a skeleton should exist for given IDs but you can use the omit_failures parameter to make it so you get the skeletons that exist and ignore those that don't without throwing an exception. On my end, I can try to make the error message more informative.
Hi!
First of all, thank you for creating this library. It has been extremely useful, and the documentation is excellent.
I am encountering an issue with the
get_skeletons
function. According to the documentation, this function should work for proofread root IDs 630 and 783. To ensure the neuron IDs are up-to-date, I use theis_latest_root
function. Here is the relevant code snippet:This returns:
Based on this, I assumed I could use the get_skeletons function for both IDs. However, while the function works for the first ID, it fails for the second one. Here is the code and error message:
Btw I retrieved both IDs from the Codex Flywire website.
Does anyone know why this might be happening? Is it possible that the
get_skeletons
function is accessing an outdated dataset?Thank you in advance for your help!
The text was updated successfully, but these errors were encountered: