The format is based on Keep a Changelog and this project adheres to Semantic Versioning.
- The metrics are now in the multiqc report instead of in a separate file
- Updated the pipeline template to nf-core v2.13.1
- Migrate from nf-validation to nf-schema
- The
--bin_sizes
parameter now only takes kilobases as input (bases are no longer allowed)
- Added a new parameter
--bin_sizes
that takes a comma-delimited list of bin sizes to create references for. This will make it possible to create references for multiple bin sizes at once.
- Added a gender metrics output file (can be turned off by using
--no_metrics
) - Added a new field to the samplesheet (
gender
). This optional field is used for the generation of the metrics file. The gender will be determined by the pipeline if this field is empty.
- Added parameter information to the docs
Initial release of nf-cmgg/wisecondorx, created with the nf-core template.