Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Improve website on parameters section Alignment Options for argument --save_unaligned #385

Closed
aghr opened this issue Mar 20, 2024 · 1 comment
Closed

Improve website on parameters section Alignment Options for argument --save_unaligned #385

aghr opened this issue Mar 20, 2024 · 1 comment
Labels
enhancement

Comments

@aghr
Copy link

aghr commented Mar 20, 2024

Description of feature

The description of parameter --save_unaligned reads: "Where possible, save unaligned reads from either STAR, HISAT2 or Salmon to the results directory." but if I got it right then does the pipeline offer mappers BWA, Bowtie2, and STAR, but not HISAT2 nor Salmon.
This was referenced Jul 3, 2024
Closed
Merged
@JoseEspinosa
Copy link
Member

Thanks for reporting @aghr
Fixed by #395

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
enhancement
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@JoseEspinosa @aghr