{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":127293091,"defaultBranch":"master","name":"rnaseq","ownerLogin":"nf-core","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2018-03-29T13:10:58.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/35520196?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1721230216.0","currentOid":""},"activityList":{"items":[{"before":"5507a6d482667e67de0212cfa0055298118db470","after":null,"ref":"refs/heads/factor_out_preprocessing","pushedAt":"2024-07-17T15:30:16.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"}},{"before":"66f3594c79f8313ff33cf4b75a3613b925056e71","after":"5bd04b43835561cdea3672cb72da9b1c2fa6fb96","ref":"refs/heads/dev","pushedAt":"2024-07-17T15:30:12.000Z","pushType":"pr_merge","commitsCount":13,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Merge pull request #1342 from nf-core/factor_out_preprocessing\n\nFactor out preprocessing","shortMessageHtmlLink":"Merge pull request #1342 from nf-core/factor_out_preprocessing"}},{"before":"6bb1a791ad4ec46f563686957a99682da79db06e","after":"5507a6d482667e67de0212cfa0055298118db470","ref":"refs/heads/factor_out_preprocessing","pushedAt":"2024-07-17T13:35:11.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Merge branch 'factor_out_preprocessing' of https://github.com/nf-core/rnaseq into factor_out_preprocessing","shortMessageHtmlLink":"Merge branch 'factor_out_preprocessing' of https://github.com/nf-core…"}},{"before":"fe950ba0b07aa2103ae250bfd24afb64104ebcbf","after":"6bb1a791ad4ec46f563686957a99682da79db06e","ref":"refs/heads/factor_out_preprocessing","pushedAt":"2024-07-17T11:12:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Install from modules master","shortMessageHtmlLink":"Install from modules master"}},{"before":"259dccfed00a19a18911739ec2031ea2b502ccea","after":"fe950ba0b07aa2103ae250bfd24afb64104ebcbf","ref":"refs/heads/factor_out_preprocessing","pushedAt":"2024-07-17T10:32:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Move strandedness function testing to swf","shortMessageHtmlLink":"Move strandedness function testing to swf"}},{"before":"3da0bc3ec5c0c6259dc1537230d24b070351366b","after":"259dccfed00a19a18911739ec2031ea2b502ccea","ref":"refs/heads/factor_out_preprocessing","pushedAt":"2024-07-17T09:45:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Update modules.json","shortMessageHtmlLink":"Update modules.json"}},{"before":"2447c6b76771860ed00900419f2e5bf4fa841a51","after":"3da0bc3ec5c0c6259dc1537230d24b070351366b","ref":"refs/heads/factor_out_preprocessing","pushedAt":"2024-07-17T09:43:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Fix tests","shortMessageHtmlLink":"Fix tests"}},{"before":"6a22103bdd6615ebf53c661e20b7b3f7166e6d3f","after":"2447c6b76771860ed00900419f2e5bf4fa841a51","ref":"refs/heads/factor_out_preprocessing","pushedAt":"2024-07-17T09:26:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Install swf from branch for now","shortMessageHtmlLink":"Install swf from branch for now"}},{"before":"9e8f1e0b4d3a98b0e07e48377f363beeb689e8fc","after":"6a22103bdd6615ebf53c661e20b7b3f7166e6d3f","ref":"refs/heads/factor_out_preprocessing","pushedAt":"2024-07-17T09:20:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"fix up ribo db wiring","shortMessageHtmlLink":"fix up ribo db wiring"}},{"before":"4d308443227a6431e118456c2700a3f20bdab2df","after":"9e8f1e0b4d3a98b0e07e48377f363beeb689e8fc","ref":"refs/heads/factor_out_preprocessing","pushedAt":"2024-07-17T08:27:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"update modules.json","shortMessageHtmlLink":"update modules.json"}},{"before":"2389882790283afd7fdc2b3cf9fd2b53ea5d5b31","after":"4d308443227a6431e118456c2700a3f20bdab2df","ref":"refs/heads/factor_out_preprocessing","pushedAt":"2024-07-17T08:17:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Update RNAseq preprocessing swf","shortMessageHtmlLink":"Update RNAseq preprocessing swf"}},{"before":"731538691d49544b92c78bdc6d9547026eba2419","after":"2389882790283afd7fdc2b3cf9fd2b53ea5d5b31","ref":"refs/heads/factor_out_preprocessing","pushedAt":"2024-07-16T11:09:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"update changelog","shortMessageHtmlLink":"update changelog"}},{"before":"66f3594c79f8313ff33cf4b75a3613b925056e71","after":"731538691d49544b92c78bdc6d9547026eba2419","ref":"refs/heads/factor_out_preprocessing","pushedAt":"2024-07-16T10:58:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Factor out preprocessing logic to nf-core subworkflow","shortMessageHtmlLink":"Factor out preprocessing logic to nf-core subworkflow"}},{"before":null,"after":"66f3594c79f8313ff33cf4b75a3613b925056e71","ref":"refs/heads/factor_out_preprocessing","pushedAt":"2024-07-16T08:40:32.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Merge pull request #1336 from adamrtalbot/use_nf_test_action\n\nUse nf-core/setup-nf-test action for portability","shortMessageHtmlLink":"Merge pull request #1336 from adamrtalbot/use_nf_test_action"}},{"before":"e1b2ef7a5c7d48eeb7ab9a6053c9768ef11b906e","after":"66f3594c79f8313ff33cf4b75a3613b925056e71","ref":"refs/heads/dev","pushedAt":"2024-07-15T16:52:23.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Merge pull request #1336 from adamrtalbot/use_nf_test_action\n\nUse nf-core/setup-nf-test action for portability","shortMessageHtmlLink":"Merge pull request #1336 from adamrtalbot/use_nf_test_action"}},{"before":"f35f51b686f01d9dcd61517d15dd65dd0673d867","after":null,"ref":"refs/heads/rename_samples","pushedAt":"2024-07-15T16:03:25.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"}},{"before":"99fb7efc9d2b17a7940f745570ff162c04548bc4","after":"e1b2ef7a5c7d48eeb7ab9a6053c9768ef11b906e","ref":"refs/heads/dev","pushedAt":"2024-07-15T16:03:22.000Z","pushType":"pr_merge","commitsCount":13,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Merge pull request #1341 from nf-core/rename_samples\n\nAdd rename in the MultiQC report for samples without techreps","shortMessageHtmlLink":"Merge pull request #1341 from nf-core/rename_samples"}},{"before":"d7ed3530729d7851cbd2ba1e3bebb0abbd0a4c85","after":"f35f51b686f01d9dcd61517d15dd65dd0673d867","ref":"refs/heads/rename_samples","pushedAt":"2024-07-15T15:10:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Update CHANGELOG.md","shortMessageHtmlLink":"Update CHANGELOG.md"}},{"before":"182f5232f240b2882d84ed010eea66651a045f6c","after":"d7ed3530729d7851cbd2ba1e3bebb0abbd0a4c85","ref":"refs/heads/rename_samples","pushedAt":"2024-07-15T15:03:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Update main.nf","shortMessageHtmlLink":"Update main.nf"}},{"before":"c1e179bfaac2ba1a94696025484ab61240fb5fb4","after":"182f5232f240b2882d84ed010eea66651a045f6c","ref":"refs/heads/rename_samples","pushedAt":"2024-07-15T15:01:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Clarify comment","shortMessageHtmlLink":"Clarify comment"}},{"before":"9135a7a89e3c385fb9538147ae59908c0088babf","after":"c1e179bfaac2ba1a94696025484ab61240fb5fb4","ref":"refs/heads/rename_samples","pushedAt":"2024-07-15T14:32:57.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Merge branch 'rename_samples' of https://github.com/nf-core/rnaseq into rename_samples","shortMessageHtmlLink":"Merge branch 'rename_samples' of https://github.com/nf-core/rnaseq in…"}},{"before":"ccd95abe8ccbdeb8677cbd9fe704e187f13d7654","after":"99fb7efc9d2b17a7940f745570ff162c04548bc4","ref":"refs/heads/dev","pushedAt":"2024-07-15T09:59:33.000Z","pushType":"pr_merge","commitsCount":15,"pusher":{"login":"MatthiasZepper","name":"Matthias Zepper","path":"/MatthiasZepper","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6963520?s=80&v=4"},"commit":{"message":"Merge pull request #1314 from lazappi/annotation-documentation\n\nAdd reference recommendations to usage docs","shortMessageHtmlLink":"Merge pull request #1314 from lazappi/annotation-documentation"}},{"before":"39071b9032a298eeb593fa545750171b5bc35201","after":"9135a7a89e3c385fb9538147ae59908c0088babf","ref":"refs/heads/rename_samples","pushedAt":"2024-07-15T09:36:00.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Merge branch 'dev' into rename_samples","shortMessageHtmlLink":"Merge branch 'dev' into rename_samples"}},{"before":"17444ffa293ddfd997c021c091fa66d0d50012b0","after":null,"ref":"refs/heads/update-azure-batch-guidance","pushedAt":"2024-07-15T08:48:13.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"}},{"before":"18d8d10c69e12f8f3c4aa3938bfeddaa9a64dcb8","after":"ccd95abe8ccbdeb8677cbd9fe704e187f13d7654","ref":"refs/heads/dev","pushedAt":"2024-07-15T08:48:09.000Z","pushType":"pr_merge","commitsCount":5,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"Merge pull request #1340 from nf-core/update-azure-batch-guidance\n\nUpdate Azure Batch guidance","shortMessageHtmlLink":"Merge pull request #1340 from nf-core/update-azure-batch-guidance"}},{"before":"6fccd133155431b5c4d79b21f20219e5b1bb3036","after":"39071b9032a298eeb593fa545750171b5bc35201","ref":"refs/heads/rename_samples","pushedAt":"2024-07-15T08:41:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"simplify logic to generate renaming table","shortMessageHtmlLink":"simplify logic to generate renaming table"}},{"before":"e05713413236290232fff53cf8938dfd84d1a6aa","after":"17444ffa293ddfd997c021c091fa66d0d50012b0","ref":"refs/heads/update-azure-batch-guidance","pushedAt":"2024-07-12T17:46:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"adamrtalbot","name":"Adam Talbot","path":"/adamrtalbot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12817534?s=80&v=4"},"commit":{"message":"Update CHANGELOG.md","shortMessageHtmlLink":"Update CHANGELOG.md"}},{"before":"c465f90b36a0d2ecc622ea65e6ad12312bd0d2e3","after":"e05713413236290232fff53cf8938dfd84d1a6aa","ref":"refs/heads/update-azure-batch-guidance","pushedAt":"2024-07-12T17:16:22.000Z","pushType":"push","commitsCount":23,"pusher":{"login":"adamrtalbot","name":"Adam Talbot","path":"/adamrtalbot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12817534?s=80&v=4"},"commit":{"message":"Merge branch 'dev' into update-azure-batch-guidance","shortMessageHtmlLink":"Merge branch 'dev' into update-azure-batch-guidance"}},{"before":"eb4e36285139767d0cc7e31ddd614774b80cfed7","after":"c465f90b36a0d2ecc622ea65e6ad12312bd0d2e3","ref":"refs/heads/update-azure-batch-guidance","pushedAt":"2024-07-12T17:16:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"adamrtalbot","name":"Adam Talbot","path":"/adamrtalbot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12817534?s=80&v=4"},"commit":{"message":"Remove Azure specific guidance\n\nNo longer necessary.","shortMessageHtmlLink":"Remove Azure specific guidance"}},{"before":"47484f617e33dee70a9e730a1836edb44afecd53","after":"6fccd133155431b5c4d79b21f20219e5b1bb3036","ref":"refs/heads/rename_samples","pushedAt":"2024-07-12T17:13:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pinin4fjords","name":"Jonathan Manning","path":"/pinin4fjords","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5775915?s=80&v=4"},"commit":{"message":"update CHANGELOG","shortMessageHtmlLink":"update CHANGELOG"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEggEOUAA","startCursor":null,"endCursor":null}},"title":"Activity · nf-core/rnaseq"}