{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":251281432,"defaultBranch":"master","name":"viralrecon","ownerLogin":"nf-core","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2020-03-30T11:14:12.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/35520196?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1719987263.0","currentOid":""},"activityList":{"items":[{"before":"24d89d2e09c2d7cb369600795074e31a0d62d2a9","after":null,"ref":"refs/heads/Update-container-fastqc","pushedAt":"2024-07-03T06:14:23.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"}},{"before":"3731dd3a32a67a2648ea22c2bd980c224abdaee2","after":"24d89d2e09c2d7cb369600795074e31a0d62d2a9","ref":"refs/heads/Update-container-fastqc","pushedAt":"2024-07-03T06:02:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"},"commit":{"message":"update fastqc","shortMessageHtmlLink":"update fastqc"}},{"before":null,"after":"3731dd3a32a67a2648ea22c2bd980c224abdaee2","ref":"refs/heads/Update-container-fastqc","pushedAt":"2024-07-03T05:30:25.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"},"commit":{"message":"Merge pull request #361 from nf-core/dev\n\nDev -> Master for 2.6 release","shortMessageHtmlLink":"Merge pull request #361 from nf-core/dev"}},{"before":"8161eb9051d3779a77d3f6a84ec296ae034afd02","after":"ae67ea4113f5b23d147512531a39abd6a57db24d","ref":"refs/heads/dev","pushedAt":"2024-06-18T07:11:21.000Z","pushType":"pr_merge","commitsCount":15,"pusher":{"login":"svarona","name":"Sarai Varona","path":"/svarona","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25959991?s=80&v=4"},"commit":{"message":"Merge pull request #434 from BU-ISCIII/blast\n\nEnhanced BLAST results filtering","shortMessageHtmlLink":"Merge pull request #434 from BU-ISCIII/blast"}},{"before":"c032f88810320a0f934cf16155f81342a65cbcdf","after":"8161eb9051d3779a77d3f6a84ec296ae034afd02","ref":"refs/heads/dev","pushedAt":"2024-06-10T08:52:25.000Z","pushType":"pr_merge","commitsCount":15,"pusher":{"login":"maxulysse","name":"Maxime U Garcia","path":"/maxulysse","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1019628?s=80&v=4"},"commit":{"message":"Merge pull request #430 from BU-ISCIII/dev_template\n\nTemplate update for nf-core/tools version 2.14.1","shortMessageHtmlLink":"Merge pull request #430 from BU-ISCIII/dev_template"}},{"before":"6160aabf26a681ee9fd22e29883f8996ab85e8c1","after":null,"ref":"refs/heads/417-allow-skipping-freyja-boot","pushedAt":"2024-05-10T07:37:06.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"}},{"before":"6dee7cbf2c56fb8fd2f2b2da658d4501f3f984c1","after":"c032f88810320a0f934cf16155f81342a65cbcdf","ref":"refs/heads/dev","pushedAt":"2024-05-10T07:37:00.000Z","pushType":"pr_merge","commitsCount":7,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"},"commit":{"message":"Merge pull request #426 from nf-core/417-allow-skipping-freyja-boot\n\n417 allow skipping freyja boot","shortMessageHtmlLink":"Merge pull request #426 from nf-core/417-allow-skipping-freyja-boot"}},{"before":null,"after":"358dae71ab341651db1017c5ca33ee3be171cae8","ref":"refs/heads/nf-core-template-merge-2.14.1","pushedAt":"2024-05-09T11:45:04.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nf-core-bot","name":"nf-core bot","path":"/nf-core-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42236957?s=80&v=4"},"commit":{"message":"Template update for nf-core/tools version 2.14.1","shortMessageHtmlLink":"Template update for nf-core/tools version 2.14.1"}},{"before":"9020af61b611879fef9c6850e69fe8e4e7dce6c8","after":"358dae71ab341651db1017c5ca33ee3be171cae8","ref":"refs/heads/TEMPLATE","pushedAt":"2024-05-09T11:45:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nf-core-bot","name":"nf-core bot","path":"/nf-core-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42236957?s=80&v=4"},"commit":{"message":"Template update for nf-core/tools version 2.14.1","shortMessageHtmlLink":"Template update for nf-core/tools version 2.14.1"}},{"before":null,"after":"9020af61b611879fef9c6850e69fe8e4e7dce6c8","ref":"refs/heads/nf-core-template-merge-2.14.0","pushedAt":"2024-05-08T14:58:19.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nf-core-bot","name":"nf-core bot","path":"/nf-core-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42236957?s=80&v=4"},"commit":{"message":"Template update for nf-core/tools version 2.14.0","shortMessageHtmlLink":"Template update for nf-core/tools version 2.14.0"}},{"before":"b1747abd72122a58c63817098abcc902cf664f92","after":"9020af61b611879fef9c6850e69fe8e4e7dce6c8","ref":"refs/heads/TEMPLATE","pushedAt":"2024-05-08T14:58:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nf-core-bot","name":"nf-core bot","path":"/nf-core-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42236957?s=80&v=4"},"commit":{"message":"Template update for nf-core/tools version 2.14.0","shortMessageHtmlLink":"Template update for nf-core/tools version 2.14.0"}},{"before":"e47eca39d39220dd7bda8be65d801bc77575a06d","after":"6160aabf26a681ee9fd22e29883f8996ab85e8c1","ref":"refs/heads/417-allow-skipping-freyja-boot","pushedAt":"2024-05-06T12:02:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"},"commit":{"message":"update utils_nfcore_pipeline","shortMessageHtmlLink":"update utils_nfcore_pipeline"}},{"before":"6dee7cbf2c56fb8fd2f2b2da658d4501f3f984c1","after":null,"ref":"refs/heads/fix-linting","pushedAt":"2024-05-06T11:45:44.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"}},{"before":null,"after":"6dee7cbf2c56fb8fd2f2b2da658d4501f3f984c1","ref":"refs/heads/fix-linting","pushedAt":"2024-05-06T11:22:40.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"},"commit":{"message":"Merge pull request #401 from BU-ISCIII/custom_gtf\n\nAdded option to add a custom annotation, clarified multiQC results and fixed issues","shortMessageHtmlLink":"Merge pull request #401 from BU-ISCIII/custom_gtf"}},{"before":"3057be523b5930fdaf4e8f0105b2932eda3688b4","after":"e47eca39d39220dd7bda8be65d801bc77575a06d","ref":"refs/heads/417-allow-skipping-freyja-boot","pushedAt":"2024-05-03T09:56:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"},"commit":{"message":"update docs","shortMessageHtmlLink":"update docs"}},{"before":"d568cc645170e3eeb9ffa89e0dde9f97b3c27976","after":"3057be523b5930fdaf4e8f0105b2932eda3688b4","ref":"refs/heads/417-allow-skipping-freyja-boot","pushedAt":"2024-05-03T09:45:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"},"commit":{"message":"add skip-option for freyja boot in nanopore","shortMessageHtmlLink":"add skip-option for freyja boot in nanopore"}},{"before":"c031263b5b16b4eb0f75edd6fdab93283028316c","after":"d568cc645170e3eeb9ffa89e0dde9f97b3c27976","ref":"refs/heads/417-allow-skipping-freyja-boot","pushedAt":"2024-05-03T09:35:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"},"commit":{"message":"update freyja modules","shortMessageHtmlLink":"update freyja modules"}},{"before":"f27f9f9aee4eeae0dfb663582264c08e8806f0be","after":"c031263b5b16b4eb0f75edd6fdab93283028316c","ref":"refs/heads/417-allow-skipping-freyja-boot","pushedAt":"2024-05-02T16:11:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"},"commit":{"message":"bootstraps - boot","shortMessageHtmlLink":"bootstraps - boot"}},{"before":"6dee7cbf2c56fb8fd2f2b2da658d4501f3f984c1","after":"f27f9f9aee4eeae0dfb663582264c08e8806f0be","ref":"refs/heads/417-allow-skipping-freyja-boot","pushedAt":"2024-05-02T12:00:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"},"commit":{"message":"add new param & schema update","shortMessageHtmlLink":"add new param & schema update"}},{"before":"3731dd3a32a67a2648ea22c2bd980c224abdaee2","after":"6dee7cbf2c56fb8fd2f2b2da658d4501f3f984c1","ref":"refs/heads/417-allow-skipping-freyja-boot","pushedAt":"2024-05-02T10:12:54.000Z","pushType":"push","commitsCount":187,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"},"commit":{"message":"Merge pull request #401 from BU-ISCIII/custom_gtf\n\nAdded option to add a custom annotation, clarified multiQC results and fixed issues","shortMessageHtmlLink":"Merge pull request #401 from BU-ISCIII/custom_gtf"}},{"before":null,"after":"3731dd3a32a67a2648ea22c2bd980c224abdaee2","ref":"refs/heads/417-allow-skipping-freyja-boot","pushedAt":"2024-05-02T10:10:44.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"Joon-Klaps","name":"Joon Klaps","path":"/Joon-Klaps","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/61584065?s=80&v=4"},"commit":{"message":"Merge pull request #361 from nf-core/dev\n\nDev -> Master for 2.6 release","shortMessageHtmlLink":"Merge pull request #361 from nf-core/dev"}},{"before":"1883a68346f87cc2534323f8dbeceec554a7edc2","after":"6dee7cbf2c56fb8fd2f2b2da658d4501f3f984c1","ref":"refs/heads/dev","pushedAt":"2024-04-22T13:58:57.000Z","pushType":"pr_merge","commitsCount":32,"pusher":{"login":"svarona","name":"Sarai Varona","path":"/svarona","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25959991?s=80&v=4"},"commit":{"message":"Merge pull request #401 from BU-ISCIII/custom_gtf\n\nAdded option to add a custom annotation, clarified multiQC results and fixed issues","shortMessageHtmlLink":"Merge pull request #401 from BU-ISCIII/custom_gtf"}},{"before":"168373927bbac66c151858b490336c62ba66d3c1","after":"1883a68346f87cc2534323f8dbeceec554a7edc2","ref":"refs/heads/dev","pushedAt":"2024-04-22T10:20:24.000Z","pushType":"pr_merge","commitsCount":30,"pusher":{"login":"svarona","name":"Sarai Varona","path":"/svarona","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25959991?s=80&v=4"},"commit":{"message":"Merge pull request #424 from BU-ISCIII/dev_template\n\nTemplate update for nf-core/tools v2.13.1","shortMessageHtmlLink":"Merge pull request #424 from BU-ISCIII/dev_template"}},{"before":null,"after":"b1747abd72122a58c63817098abcc902cf664f92","ref":"refs/heads/nf-core-template-merge-2.13.1","pushedAt":"2024-02-29T16:16:33.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nf-core-bot","name":"nf-core bot","path":"/nf-core-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42236957?s=80&v=4"},"commit":{"message":"Template update for nf-core/tools version 2.13.1","shortMessageHtmlLink":"Template update for nf-core/tools version 2.13.1"}},{"before":"a5118d8faaac797c0b2f815362eb1997acf65a88","after":"b1747abd72122a58c63817098abcc902cf664f92","ref":"refs/heads/TEMPLATE","pushedAt":"2024-02-29T16:16:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nf-core-bot","name":"nf-core bot","path":"/nf-core-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42236957?s=80&v=4"},"commit":{"message":"Template update for nf-core/tools version 2.13.1","shortMessageHtmlLink":"Template update for nf-core/tools version 2.13.1"}},{"before":null,"after":"a5118d8faaac797c0b2f815362eb1997acf65a88","ref":"refs/heads/nf-core-template-merge-2.13","pushedAt":"2024-02-20T15:31:12.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nf-core-bot","name":"nf-core bot","path":"/nf-core-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42236957?s=80&v=4"},"commit":{"message":"Template update for nf-core/tools version 2.13","shortMessageHtmlLink":"Template update for nf-core/tools version 2.13"}},{"before":"c27f216e139002705443b0147edddbe54b736e21","after":"a5118d8faaac797c0b2f815362eb1997acf65a88","ref":"refs/heads/TEMPLATE","pushedAt":"2024-02-20T15:31:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nf-core-bot","name":"nf-core bot","path":"/nf-core-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42236957?s=80&v=4"},"commit":{"message":"Template update for nf-core/tools version 2.13","shortMessageHtmlLink":"Template update for nf-core/tools version 2.13"}},{"before":"d9152069af82639ef1fc6a6bf1282b21ab291dab","after":"168373927bbac66c151858b490336c62ba66d3c1","ref":"refs/heads/dev","pushedAt":"2024-02-16T08:29:19.000Z","pushType":"pr_merge","commitsCount":19,"pusher":{"login":"svarona","name":"Sarai Varona","path":"/svarona","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25959991?s=80&v=4"},"commit":{"message":"Merge pull request #416 from BU-ISCIII/dev_template\n\nTemplate update for nf-core/tools version 2.12","shortMessageHtmlLink":"Merge pull request #416 from BU-ISCIII/dev_template"}},{"before":null,"after":"c27f216e139002705443b0147edddbe54b736e21","ref":"refs/heads/nf-core-template-merge-2.12","pushedAt":"2024-01-29T15:13:24.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nf-core-bot","name":"nf-core bot","path":"/nf-core-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42236957?s=80&v=4"},"commit":{"message":"Template update for nf-core/tools version 2.12","shortMessageHtmlLink":"Template update for nf-core/tools version 2.12"}},{"before":"48f8032a37ae8c8c589f82ece6e7afdbcf83aecf","after":"c27f216e139002705443b0147edddbe54b736e21","ref":"refs/heads/TEMPLATE","pushedAt":"2024-01-29T15:13:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nf-core-bot","name":"nf-core bot","path":"/nf-core-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/42236957?s=80&v=4"},"commit":{"message":"Template update for nf-core/tools version 2.12","shortMessageHtmlLink":"Template update for nf-core/tools version 2.12"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEdYTWDwA","startCursor":null,"endCursor":null}},"title":"Activity ยท nf-core/viralrecon"}