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Human Gene

This repository processes NCBI gene information, extracting data for protein-coding genes, and saves it in a CSV file.

Execution

conda env create -f environment.yml 

conda activate human-gene

bash download.sh

python process.py

Input

  • Homo_sapiens.gene_info.gz
    • The file from NCBI is a compressed archive containing detailed information on genes.

Output

  • protein_coding_gene.csv
    • The output file is a CSV containing extracted data on protein-coding genes from the NCBI dataset.