From 8ff2f460dac9d8800dfd9b3e953ffa4e17f57a31 Mon Sep 17 00:00:00 2001
From: Shawn Tan <76212760+shawntanzk@users.noreply.github.com>
Date: Fri, 18 Mar 2022 09:59:41 +0000
Subject: [PATCH 1/2] added some sparql queries

Fixes https://github.com/obophenotype/brain_data_standards_ontologies/issues/275
---
 src/sparql/pcl-celltypes-count.sparql | 10 ++++++++++
 src/sparql/pcl_individual.sparql      | 10 ++++++++++
 2 files changed, 20 insertions(+)
 create mode 100644 src/sparql/pcl-celltypes-count.sparql
 create mode 100644 src/sparql/pcl_individual.sparql

diff --git a/src/sparql/pcl-celltypes-count.sparql b/src/sparql/pcl-celltypes-count.sparql
new file mode 100644
index 00000000..cb0095e1
--- /dev/null
+++ b/src/sparql/pcl-celltypes-count.sparql
@@ -0,0 +1,10 @@
+PREFIX owl: <http://www.w3.org/2002/07/owl#>
+PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
+PREFIX CL: <http://purl.obolibrary.org/obo/CL_>
+
+SELECT (COUNT (DISTINCT ?term) as ?pclcells)
+WHERE {
+  	?term a owl:Class . 
+  	?term rdfs:subClassOf* CL:0000003
+  FILTER(isIRI(?term) && (STRSTARTS(str(?term), "http://purl.obolibrary.org/obo/PCL_")))
+}
\ No newline at end of file
diff --git a/src/sparql/pcl_individual.sparql b/src/sparql/pcl_individual.sparql
new file mode 100644
index 00000000..96d8efce
--- /dev/null
+++ b/src/sparql/pcl_individual.sparql
@@ -0,0 +1,10 @@
+PREFIX owl: <http://www.w3.org/2002/07/owl#>
+
+SELECT (COUNT (DISTINCT ?ind) as ?indcount)
+WHERE {
+    ?ind a owl:NamedIndividual .
+    { ?s3 ?p3 ?ind. }
+    UNION
+    { ?ind ?p4 ?o4 . }
+  FILTER(isIRI(?ind) && (STRSTARTS(str(?ind), "http://purl.obolibrary.org/obo/PCL_")))
+}
\ No newline at end of file

From 58e8fd230bc79ed02c2c2e31996a325108c672bc Mon Sep 17 00:00:00 2001
From: Shawn Tan <76212760+shawntanzk@users.noreply.github.com>
Date: Fri, 18 Mar 2022 11:05:27 +0000
Subject: [PATCH 2/2] Create pcl_cluster.sparql

---
 src/sparql/pcl_cluster.sparql | 9 +++++++++
 1 file changed, 9 insertions(+)
 create mode 100644 src/sparql/pcl_cluster.sparql

diff --git a/src/sparql/pcl_cluster.sparql b/src/sparql/pcl_cluster.sparql
new file mode 100644
index 00000000..da31da6f
--- /dev/null
+++ b/src/sparql/pcl_cluster.sparql
@@ -0,0 +1,9 @@
+PREFIX owl: <http://www.w3.org/2002/07/owl#>
+PREFIX pcl: <http://purl.obolibrary.org/obo/PCL_>
+
+SELECT (COUNT (DISTINCT ?ind) as ?indcount)
+WHERE {
+    ?ind a owl:NamedIndividual ;
+    pcl:0010059 ?cluster.
+  FILTER(isIRI(?ind) && (STRSTARTS(str(?ind), "http://purl.obolibrary.org/obo/PCL_")))
+}
\ No newline at end of file