diff --git a/src/ontology/cl-edit.owl b/src/ontology/cl-edit.owl index e9cca64d2..9505fab2f 100644 --- a/src/ontology/cl-edit.owl +++ b/src/ontology/cl-edit.owl @@ -2473,23 +2473,12 @@ Declaration(Class(obo:CL_4023038)) Declaration(Class(obo:CL_4023040)) Declaration(Class(obo:CL_4023041)) Declaration(Class(obo:CL_4023042)) - Declaration(Class(obo:CL_4023046)) - - +Declaration(Class(obo:CL_4023047)) +Declaration(Class(obo:CL_4023048)) Declaration(Class(obo:CL_4023049)) - - Declaration(Class(obo:CL_4023050)) - - -Declaration(Class(obo:CL_4023048)) - -Declaration(Class(obo:CL_4023047)) - - - - +Declaration(Class(obo:CL_4023051)) Declaration(Class(obo:CP_0000000)) Declaration(Class(obo:CP_0000025)) Declaration(Class(obo:CP_0000027)) @@ -27748,7 +27737,6 @@ SubClassOf(obo:CL_4023042 obo:CL_4023013) # Class: obo:CL_4023046 (L6b subplate glutamatergic neuron of the primary motor cortex (Mus musculus)) - AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:33184512") obo:IAO_0000115 obo:CL_4023046 "An excitatory glutamatergic neuron transcriptomically related to the CT subclass, with a soma preferentially located in the bottom of L6 of the primary motor cortex.") AnnotationAssertion( obo:CL_4023046 ) AnnotationAssertion(oboInOwl:inSubset obo:CL_4023046 ) @@ -27757,6 +27745,29 @@ SubClassOf(obo:CL_4023046 obo:CL_4023038) SubClassOf(obo:CL_4023046 ObjectSomeValuesFrom(obo:RO_0002100 obo:UBERON_0001384)) SubClassOf(obo:CL_4023046 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_10090)) +# Class: obo:CL_4023047 (L2/3 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (Mus musculus)) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "DOI:10.1101/2020.10.19.343129") obo:IAO_0000115 obo:CL_4023047 "An intratelencephalic-projecting glutamatergic neuron with a soma found in cortical layer 2/3.") +AnnotationAssertion( obo:CL_4023047 ) +AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_4023047 "L2/3 IT MOp (Mus)") +AnnotationAssertion(oboInOwl:inSubset obo:CL_4023047 ) +AnnotationAssertion(rdfs:label obo:CL_4023047 "L2/3 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (Mus musculus)") +SubClassOf(obo:CL_4023047 obo:CL_4023040) +SubClassOf(obo:CL_4023047 ObjectSomeValuesFrom(obo:RO_0002100 obo:UBERON_0001384)) +SubClassOf(obo:CL_4023047 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_10090)) + +# Class: obo:CL_4023048 (L4/5 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (Mus musculus)) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:33184512") obo:IAO_0000115 obo:CL_4023048 "An intratelencephalic-projecting glutamatergic with a soma located in upper L5 of the primary motor cortex. These cells have thin untufted apical dendrites.") +AnnotationAssertion( obo:CL_4023048 ) +AnnotationAssertion(oboInOwl:hasDbXref obo:CL_4023048 "ILX:0770174") +AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_4023048 "L4/5 IT MOp (Mus)") +AnnotationAssertion(oboInOwl:inSubset obo:CL_4023048 ) +AnnotationAssertion(rdfs:label obo:CL_4023048 "L4/5 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (Mus musculus)") +SubClassOf(obo:CL_4023048 obo:CL_4023040) +SubClassOf(obo:CL_4023048 ObjectSomeValuesFrom(obo:RO_0002100 obo:UBERON_0001384)) +SubClassOf(obo:CL_4023048 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_10090)) + # Class: obo:CL_4023049 (L5 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (Mus musculus)) AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:33184512") obo:IAO_0000115 obo:CL_4023049 "An intratelencephalic-projecting glutamatergic neuron with a soma found in L5 of the primary motor cortex.") @@ -27771,7 +27782,6 @@ SubClassOf(obo:CL_4023049 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_1009 # Class: obo:CL_4023050 (L6 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (Mus musculus)) - AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:9236245") obo:IAO_0000115 obo:CL_4023050 "An intratelencephalic-projecting glutamatergic neuron with a soma found in L6 of the primary motor cortex. These cells are short untufted pyramidal cells, which could be stellate or inverted.") AnnotationAssertion( obo:CL_4023050 ) AnnotationAssertion(oboInOwl:hasDbXref obo:CL_4023050 "ILX:0770158") @@ -27782,32 +27792,15 @@ SubClassOf(obo:CL_4023050 obo:CL_4023040) SubClassOf(obo:CL_4023050 ObjectSomeValuesFrom(obo:RO_0002100 obo:UBERON_0001384)) SubClassOf(obo:CL_4023050 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_10090)) -# Class: obo:CL_4023048 (L4/5 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (Mus musculus)) - -AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:33184512") obo:IAO_0000115 obo:CL_4023048 "An intratelencephalic-projecting glutamatergic with a soma located in upper L5 of the primary motor cortex. These cells have thin untufted apical dendrites.") -AnnotationAssertion( obo:CL_4023048 ) -AnnotationAssertion(oboInOwl:hasDbXref obo:CL_4023048 "ILX:0770174") -AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_4023048 "L4/5 IT MOp (Mus)") -AnnotationAssertion(oboInOwl:inSubset obo:CL_4023048 ) -AnnotationAssertion(rdfs:label obo:CL_4023048 "L4/5 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (Mus musculus)") -SubClassOf(obo:CL_4023048 obo:CL_4023040) -SubClassOf(obo:CL_4023048 ObjectSomeValuesFrom(obo:RO_0002100 obo:UBERON_0001384)) -SubClassOf(obo:CL_4023048 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_10090)) - -# Class: obo:CL_4023047 (L2/3 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (Mus musculus)) - -AnnotationAssertion(Annotation(oboInOwl:hasDbXref "DOI:10.1101/2020.10.19.343129") obo:IAO_0000115 obo:CL_4023047 "An intratelencephalic-projecting glutamatergic neuron with a soma found in cortical layer 2/3.") -AnnotationAssertion( obo:CL_4023047 ) -AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_4023047 "L2/3 IT MOp (Mus)") -AnnotationAssertion(oboInOwl:inSubset obo:CL_4023047 ) -AnnotationAssertion(rdfs:label obo:CL_4023047 "L2/3 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (Mus musculus)") -SubClassOf(obo:CL_4023047 obo:CL_4023040) -SubClassOf(obo:CL_4023047 ObjectSomeValuesFrom(obo:RO_0002100 obo:UBERON_0001384)) -SubClassOf(obo:CL_4023047 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_10090)) - - - +# Class: obo:CL_4023051 (L4 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (Mus musculus)) +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:33184512") obo:IAO_0000115 obo:CL_4023051 "An intratelencephalic-projecting glutamatergic neuron that is located in the boundary between L2/3 and L5 of the primary motor cortex. These cells have diverse morphologies with some pyramidal and some stellate cells.") +AnnotationAssertion( obo:CL_4023051 ) +AnnotationAssertion(oboInOwl:hasDbXref obo:CL_4023051 "ILX:0770172") +AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_4023051 "L4 IT MOp (Mus)") +AnnotationAssertion(oboInOwl:inSubset obo:CL_4023051 ) +AnnotationAssertion(rdfs:label obo:CL_4023051 "L4 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (Mus musculus)") +SubClassOf(obo:CL_4023051 obo:CL_4023040) # Class: obo:CP_0000000 (neutrophillic cytoplasm) @@ -27905,4 +27898,4 @@ SubClassOf(obo:D96882F1-8709-49AB-BCA9-772A67EA6C33 obo:GO_0005634) SubClassOf(Annotation(oboInOwl:hasDbXref ) ObjectIntersectionOf(obo:CL_0000540 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_7742)) ObjectSomeValuesFrom(obo:RO_0002202 obo:CL_0000031)) -) +) \ No newline at end of file