From dd9734c5516bbce79e3fd6986abf8178bb1ebe33 Mon Sep 17 00:00:00 2001 From: "Shah, Sandip P" <68666105+sandip-shah@users.noreply.github.com> Date: Sun, 2 Jul 2023 20:47:20 -0700 Subject: [PATCH 1/2] Update writer.py --- ome_zarr/writer.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ome_zarr/writer.py b/ome_zarr/writer.py index 27573020..cdb7b68f 100644 --- a/ome_zarr/writer.py +++ b/ome_zarr/writer.py @@ -882,7 +882,7 @@ def _create_mip( "Can't downsample if size of x or y dimension is 1. " "Shape: %s" % (image.shape,) ) - mip = scaler.nearest(image) + mip = getattr(scaler, scaler.method)(image) else: LOGGER.debug("disabling pyramid") mip = [image] From d775770e977c0fa97264dadb3542d6a076fdda66 Mon Sep 17 00:00:00 2001 From: "Shah, Sandip P" <68666105+sandip-shah@users.noreply.github.com> Date: Sun, 2 Jul 2023 20:49:11 -0700 Subject: [PATCH 2/2] Update scale.py https://github.com/scikit-image/scikit-image/issues/4294 --- ome_zarr/scale.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/ome_zarr/scale.py b/ome_zarr/scale.py index fbfe8707..07ec44b0 100644 --- a/ome_zarr/scale.py +++ b/ome_zarr/scale.py @@ -187,7 +187,7 @@ def gaussian(self, base: np.ndarray) -> List[np.ndarray]: base, downscale=self.downscale, max_layer=self.max_layer, - multichannel=False, + channel_axis=None, ) ) @@ -198,7 +198,7 @@ def laplacian(self, base: np.ndarray) -> List[np.ndarray]: base, downscale=self.downscale, max_layer=self.max_layer, - multichannel=False, + channel_axis=None, ) )