Merge pull request #77 from opencb/TASK-4163

TASK-4163 - Modify build workflow to check the same branch name of dependency

Author: juanfeSanahuja

.github/workflows/build-java-app-workflow.yml

@@ -21,17 +21,22 @@ jobs:
     steps:
       - uses: actions/checkout@v3
         with:
-         fetch-depth: '10'
+          fetch-depth: '10'
       - name: Set up JDK 8
         uses: actions/setup-java@v3
         with:
-         distribution: 'temurin'
-         java-version: '8'
-         cache: 'maven'
+          distribution: 'temurin'
+          java-version: '8'
+          cache: 'maven'
+      - name: Install dependencies branches
+        run: |
+          if [ -f "./.github/workflows/scripts/get_same_branch.sh" ]; then
+            chmod +x ./.github/workflows/scripts/get_same_branch.sh
+            ./.github/workflows/scripts/get_same_branch.sh ${{ github.ref_name }}
+          fi
       - name: Maven Build (skip tests)
         run: mvn -T 2 clean install -DskipTests ${{ inputs.maven_opts }}
       - uses: actions/upload-artifact@v3
-#        id: github.refName === 'cellbase' || github.refName === 'opencga'
         with:
           name: build-folder
           path: build

.github/workflows/scripts/get_same_branch.sh

@@ -0,0 +1,54 @@
+#!/bin/bash
+
+BRANCH_NAME=$1
+
+if [[ -z $BRANCH_NAME  ]]; then
+  echo "The first parameter is mandatory and must be a valid branch name."
+  exit 1
+fi
+
+if [[ $BRANCH_NAME != "TASK-"*   ]]; then
+  echo "No need to check dependencies."
+  exit 0
+fi
+
+function install(){
+  local REPO=$1
+  cd /home/runner/work/ || exit 2
+  #git clone [email protected]:opencb/"$REPO".git
+  git clone https://github.com/opencb/"$REPO".git
+  cd "$REPO" || exit 2
+  git checkout "$BRANCH_NAME"
+  CURRENT=$(git branch --show-current)
+  echo "Current branch name $CURRENT"
+  if [[ "$CURRENT" == "$BRANCH_NAME"  ]]; then
+    echo "Branch name $BRANCH_NAME already exists."
+    mvn clean install -DskipTests
+  else
+    echo "$CURRENT Branch is NOT EQUALS $BRANCH_NAME "
+  fi
+}
+
+PWD=$(pwd)
+echo "The absolute exec path is $PWD"
+
+if [[ "$PWD" != *"java-common-libs"* ]]; then
+  ## biodata
+  if [[ "$PWD" == *"biodata"* ]]; then
+    echo "It's biodata."
+    install "java-common-libs"
+  fi
+  ## cellbase
+  if [[ "$PWD" == *"cellbase"* ]]; then
+    echo "It's cellbase."
+    install "java-common-libs"
+    install "biodata"
+  fi
+  ## opencga
+  if [[ "$PWD" == *"opencga"* ]]; then
+    echo "It's opencga."
+    install "java-common-libs"
+    install "biodata"
+    install "cellbase"
+  fi
+fi

.github/workflows/task.yml

@@ -16,30 +16,3 @@ jobs:
     with:
       report_context: development
       report_dir: ${{ github.ref_name }}/java-common-libs/${{ github.sha }}
-
-  deploy-maven:
-    name: Deploy in maven only for renamed versions
-    uses: ./.github/workflows/deploy-maven-repository-workflow.yml
-    needs: [ build, test ]
-    if: contains( needs.build.outputs.version ,'TASK')
-    secrets: inherit
-
-  #The following jobs are to see that the previous 'if' doesn't fail and that the maven deploy is executed because it is true
-  snapshot-version:
-    name: Check SNAPSHOT version
-    needs: [ build, test ]
-    if: contains(needs.build.outputs.version ,'SNAPSHOT')
-    runs-on: ubuntu-22.04
-    steps:
-      - name: test-version-from-check
-        run: echo "Project version is " ${{ needs.build.outputs.version }}
-
-  task-version:
-    name: Check TASK version
-    needs: [ build, test ]
-    if: contains(needs.build.outputs.version ,'TASK')
-    runs-on: ubuntu-22.04
-    steps:
-      - name: test-version-from-check
-        run: echo "Project version is " ${{ needs.build.outputs.version }}
-

.github/workflows/test-analysis.yml

@@ -1,4 +1,5 @@
 name: Build and test the project
+
 on:
   workflow_call:
     secrets:
@@ -19,8 +20,10 @@ on:
       report_context:
         type: string
         required: true
+
 env:
   xb_version: "1.7.0"
+
 jobs:
   test:
     name: Test and push Sonar analysis
@@ -50,6 +53,7 @@ jobs:
         with:
           name: workdir
           path: "**/target/site"
+
   publish-test:
     name: Publish test results
     runs-on: ubuntu-22.04

commons-lib/src/main/java/org/opencb/commons/utils/PrintUtils.java

@@ -21,6 +21,10 @@ public static void print(String message) {
         System.out.print(message);
     }
 
+    public static void printSpace() {
+        System.out.print(" ");
+    }
+
     public static void print(String message, Color color) {
         System.out.print(format(message, color));
     }