cobra pie 0.2.0 release

Author: danielhyduke

README

@@ -1,4 +1,16 @@
-COBRA for Python 
+COBRA for Python
+0.2.1: TODO
+    -Move setup.py into toplevel
+    -Improve jython compatibility
+    -Improve performance using new style solvers for repetitive actions (e.g., deletion studies)
+ 
+0.2.0: Release: Subversion revision 342
+    -Minor bug fixes.
+    -Moved fallback options from new style solver solve_problem to solve
+    -Added a test script test_all.py that can be used to run the unit tests when running from the source
+    -Added cobra to pypi
+    -It's possible to run the unit tests from the setup.py script.
+
 0.2.0b1: Beta version for the 0.2.0 release
     -Migration to new style solvers
     -Increased support for Jython

cobra/README

@@ -1,5 +1,5 @@
 import sys
-__version__ = '0.2.0b1'
+__version__ = '0.2.0'
 from os import name as __name
 if __name == 'java':
     #raise Exception("Experimental modules of numpy/scipy for java that are" +\
@@ -10,7 +10,6 @@
     warn("COBRA for Python is not optimized for JAVA.  If it's slow or crashes consider increasing JVM memory")
     from core import Object, Formula, Metabolite, Gene, Reaction, Model, DictList
 else:
-    #from core import *
     from core import Object, Formula, Metabolite, Gene, Reaction, Model, DictList
     try:
         from core import ArrayBasedModel

cobra/__init__.py

@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: d23dacab69c1dc358bb2f5562d93961e
+config: 1fbc6b9c288742f403445b7a88fd0669
 tags: fbb0d17656682115ca4d033fb2f83ba1