Bump version: 0.8.0 → 0.8.1

Author: hredestig

cobra/__init__.py

@@ -13,7 +13,7 @@
     DictList, Gene, Metabolite, Model, Object, Reaction, Species)
 from cobra.util.version_info import show_versions
 
-__version__ = "0.8.0"
+__version__ = "0.8.1"
 
 # set the warning format to be prettier and fit on one line
 _cobra_path = _dirname(_abspath(__file__))

release-notes/0.8.1.md

@@ -0,0 +1,14 @@
+# Release notes for cobrapy 0.8.1
+
+## Fixes
+
+- Fix bug related to inhomogeneous sampling
+  [#558](https://github.com/opencobra/cobrapy/issues/558).  During
+  flux sampling, store the nullspace rather than the entire projection
+  (N * N.T) which reduces the memory footprint since it uses memory in
+  the order of `2 * n_reaction * n_metabolites` instead of `4 *
+  n_reactions^2` (no change in
+  speed). [PR #556](https://github.com/opencobra/cobrapy/pull/556)
+
+
+

setup.cfg

@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 0.8.0
+current_version = 0.8.1
 commit = True
 tag = True
 parse = (?P<major>\d+)

setup.py

@@ -144,7 +144,7 @@ def build_extension(self, ext):
 
 setup(
     name="cobra",
-    version="0.8.0",
+    version="0.8.1",
     packages=find_packages(),
     setup_requires=setup_requirements,
     install_requires=["future", "swiglpk", "optlang>=1.2.1",