{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"FREDA","owner":"EMSL-Computing","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":1,"issueCount":3,"starsCount":3,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-06T22:31:18.872Z"}},{"type":"Public","name":"mapDataAccess-lib","owner":"EMSL-Computing","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-06T17:29:15.549Z"}},{"type":"Public","name":"TMSig","owner":"EMSL-Computing","isFork":false,"description":"Tools to prepare and analyze a priori molecular signatures, such as gene sets.","allTopics":["gene-sets","r","r-package","molecular-signatures"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":4,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-07-25T18:15:49.159Z"}},{"type":"Public","name":"MetaMS","owner":"EMSL-Computing","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":1,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-07-25T00:36:27.731Z"}},{"type":"Public","name":"Pore2Chip","owner":"EMSL-Computing","isFork":false,"description":"A python package that takes XCT images of porous materials and generates representative lab-on-chip micromodels","allTopics":["flow","lab","neural-networks","soil","experimental-design","openpnm","xct","pore-network","model-data-fusion","reactive-transport"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":4,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-07-18T20:31:47.451Z"}},{"type":"Public","name":"CoreMS","owner":"EMSL-Computing","isFork":false,"description":"CoreMS is a comprehensive mass spectrometry software framework ","allTopics":["metabolomics","mass-spectrometry","dissolved-organic-matter","metabolomics-pipeline","complex-mixture","natural-organic-matter","soil-organic-matter","data-analysis","molecular-search","molecular-formulae-assignment","molecular-database"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":0,"starsCount":49,"forksCount":25,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-07-03T16:33:23.716Z"}},{"type":"Public","name":"EnviroMS","owner":"EMSL-Computing","isFork":false,"description":"EnviroMS is a software for natural organic matter data processing and annotation","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":4,"forksCount":1,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-20T19:08:00.009Z"}},{"type":"Public","name":"CCSz-demo","owner":"EMSL-Computing","isFork":false,"description":"Python and R scripts with examples demonstrating the conversion of IM-MS raw data to CCS/z space.","allTopics":["mass-spectrometry","ccs","ion-mobility-spectrometry","mza","pnnl-preprocessor"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-27T01:23:10.719Z"}},{"type":"Public","name":"ftmsRanalysis","owner":"EMSL-Computing","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":2,"starsCount":23,"forksCount":9,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-22T18:51:14.601Z"}},{"type":"Public","name":"isoforma-lib","owner":"EMSL-Computing","isFork":false,"description":"R package for the relative quantitation of proteoforms with MS2 fragmentation patterns","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":1,"starsCount":2,"forksCount":0,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-05T19:02:41.915Z"}},{"type":"Public","name":"nmRanalysis","owner":"EMSL-Computing","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":0,"starsCount":3,"forksCount":2,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-24T21:53:10.041Z"}},{"type":"Public","name":"pspecterlib","owner":"EMSL-Computing","isFork":false,"description":"Proteomics R package for matching peptide fragments for both digested and intact proteomics","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":1,"starsCount":8,"forksCount":1,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-02T18:07:04.869Z"}},{"type":"Public","name":"IsoForma-paper","owner":"EMSL-Computing","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-19T15:59:21.792Z"}},{"type":"Public","name":"PSpecteR","owner":"EMSL-Computing","isFork":false,"description":"The PSpecteR users manual can be accessed via the weblink below ","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-25T16:59:35.894Z"}},{"type":"Public","name":"CoreMS-AutoUpload","owner":"EMSL-Computing","isFork":false,"description":"Instrument deployed Auto Uploader integrated with CoreMS-Portal.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-01T18:21:24.419Z"}},{"type":"Public","name":"PeakDecoder","owner":"EMSL-Computing","isFork":false,"description":"A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.","allTopics":["metabolomics","mass-spectrometry","false-discovery-rate","ion-mobility-spectrometry","data-independent-acquisition","machine-learning"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":13,"forksCount":4,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-04-25T17:43:54.536Z"}},{"type":"Public","name":"grip-tomo","owner":"EMSL-Computing","isFork":false,"description":"docs: https://grip-tomo.readthedocs.io/en/latest/","allTopics":["python"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":3,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-03-24T21:25:50.256Z"}},{"type":"Public","name":"Day3-EMSL-SummerSchool-2022","owner":"EMSL-Computing","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":4,"forksCount":1,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-07-18T21:46:11.340Z"}},{"type":"Public","name":"CoreMS-Portal","owner":"EMSL-Computing","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":0,"issueCount":0,"starsCount":7,"forksCount":0,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-07-13T22:53:50.806Z"}},{"type":"Public","name":"RBD-intact-peak-analysis","owner":"EMSL-Computing","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-07-01T22:53:00.009Z"}},{"type":"Public","name":"MetaCycData","owner":"EMSL-Computing","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-10-11T16:05:50.858Z"}},{"type":"Public","name":"dimpl","owner":"EMSL-Computing","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-07-13T23:14:07.794Z"}}],"repositoryCount":22,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"EMSL-Computing repositories"}