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I've no idea how it happened but Windows definitely doesn't like it. I'm going to fix it in WSL when I get a chance this weekend. I'd ignore it for now and just stage the files you changed.
When cloning the repo on Windows there are 2 readme files -
README.ME
&readme.md
which cause this to appear in the git outputnot sure which one is the right one and whether 1 needs removing for the other at all
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