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Tried installing with conda, but it still only allows me to install up to v0.4.1.
Tried installing it with the commands given in the README
sudo apt-get install cargo zlib1g-dev xz-utils \
libclang-dev clang build-essential curl git # install dependencies
git clone https://github.com/pjedge/longshot # clone the Longshot repository
cd longshot # change directory
cargo install --path . # install Longshot
export PATH=$PATH:/home/$USER/.cargo/bin # add cargo binaries to path
As well as trying the Dockerfile I had built earlier, but in both of them, the --version command does not output the version properly:
$ longshot --version
Longshot: variant caller (SNVs) for long-read sequencing data
$ docker run -it longshot
/ # longshot --version
Longshot: variant caller (SNVs) for long-read sequencing data
I expected to get 0.4.3 from the command, but just got the description of Longshot instead.
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