VIP_conda_R.yml

name: VIP_py3.8_pandoc_conda_R
channels:
  - conda-forge
  - defaults
dependencies:
  - _libgcc_mutex=0.1
  - _r-mutex=1.0.1
  - backcall=0.2.0
  - backports=1.0
  - backports.functools_lru_cache=1.6.1
  - binutils_impl_linux-64=2.33.1
  - binutils_linux-64=2.33.1
  - bwidget=1.9.14
  - bzip2=1.0.8
  - c-ares=1.17.1
  - ca-certificates=2020.12.5
  - cairo=1.16.0
  - certifi=2020.12.5
  - cffi=1.14.4
  - curl=7.71.1
  - decorator=4.4.2
  - fontconfig=2.13.1
  - freetype=2.10.4
  - fribidi=1.0.10
  - gcc_impl_linux-64=7.3.0
  - gcc_linux-64=7.3.0
  - gfortran_impl_linux-64=7.3.0
  - gfortran_linux-64=7.3.0
  - git=2.29.2
  - glib=2.66.1
  - gmp=6.2.1
  - graphite2=1.3.13
  - gsl=2.6
  - gxx_impl_linux-64=7.3.0
  - gxx_linux-64=7.3.0
  - harfbuzz=2.4.0
  - icu=64.2
  - ipykernel=5.4.3
  - ipython=7.20.0
  - ipython_genutils=0.2.0
  - jedi=0.18.0
  - jpeg=9d
  - jq=1.6
  - jupyter_client=6.1.11
  - jupyter_core=4.7.1
  - krb5=1.17.2
  - ld_impl_linux-64=2.33.1
  - leidenalg=0.8.3
  - libblas=3.9.0
  - libcblas=3.9.0
  - libcurl=7.71.1
  - libedit=3.1.20191231
  - libev=4.33
  - libffi=3.3
  - libgcc-ng=9.1.0
  - libgfortran-ng=7.5.0
  - libgfortran4=7.5.0
  - libiconv=1.16
  - liblapack=3.9.0
  - libnghttp2=1.41.0
  - libopenblas=0.3.12
  - libpng=1.6.37
  - libsodium=1.0.18
  - libssh2=1.9.0
  - libstdcxx-ng=9.1.0
  - libtiff=4.1.0
  - libuuid=2.32.1
  - libuv=1.34.0
  - libx11-common-cos6-x86_64=1.6.4
  - libx11-cos6-x86_64=1.6.4
  - libxcb=1.13
  - libxml2=2.9.10
  - libxt-cos6-x86_64=1.1.4
  - libxt-devel-cos6-x86_64=1.1.4
  - lz4-c=1.9.2
  - make=4.3
  - markupsafe=1.1.1
  - ncurses=6.2
  - nodejs=13.13.0
  - oniguruma=6.9.6
  - openssl=1.1.1h
  - pandoc=2.5
  - pango=1.42.4
  - parso=0.8.1
  - pcre=8.44
  - pexpect=4.8.0
  - pickleshare=0.7.5
  - pip=20.3.3
  - pixman=0.38.0
  - prompt-toolkit=3.0.14
  - pthread-stubs=0.4
  - ptyprocess=0.7.0
  - pycairo=1.20.0
  - pycparser=2.20
  - pygments=2.7.4
  - python=3.8.5
  - python-dateutil=2.8.1
  - python-igraph=0.8.2
  - python_abi=3.8
  - pyzmq=20.0.0
  - r-base=3.6.3
  - readline=8.1
  - rpy2=3.3.6
  - sed=4.8
  - setuptools=52.0.0
  - simplegeneric=0.8.1
  - six=1.15.0
  - sqlite=3.33.0
  - texttable=1.6.3
  - tk=8.6.10
  - tktable=2.10
  - tornado=6.1
  - traitlets=5.0.5
  - tzlocal=2.1
  - wcwidth=0.2.5
  - wheel=0.36.2
  - xorg-kbproto=1.0.7
  - xorg-libice=1.0.10
  - xorg-libsm=1.2.3
  - xorg-libx11=1.6.12
  - xorg-libxau=1.0.9
  - xorg-libxdmcp=1.1.3
  - xorg-libxext=1.3.4
  - xorg-libxrender=0.9.10
  - xorg-renderproto=0.11.1
  - xorg-xextproto=7.3.0
  - xorg-xproto=7.0.31
  - xz=5.2.5
  - zeromq=4.3.3
  - zlib=1.2.11
  - zstd=1.4.5
  - pip:
    - aniso8601==8.1.1
    - anndata==0.8.0
    - async-generator==1.10
    - attrs==20.3.0
    - batchglm==0.7.4
    - bleach==3.2.3
    - boto3==1.14.39
    - botocore==1.17.44
    - brotli==1.0.9
    - chardet==4.0.0
    - click==7.1.2
    - cycler==0.10.0
    - dask==2021.1.1
    - defusedxml==0.6.0
    - diffxpy==0.7.4
    - docutils==0.15.2
    - entrypoints==0.3
    - fastobo==0.9.3
    - flask==1.1.2
    - flask-compress==1.8.0
    - flask-cors==3.0.10
    - flask-restful==0.3.8
    - flask-server-timing==0.1.2
    - flask-talisman==0.7.0
    - flatbuffers==1.12
    - flatten-dict==0.3.0
    - fsspec==0.7.4
    - get-version==2.1
    - gunicorn==20.0.4
    - h5py==3.7.0
    - idna==2.10
    - iniconfig==1.1.1
    - itsdangerous==1.1.0
    - jinja2==2.11.2
    - jmespath==0.10.0
    - joblib==1.0.0
    - jsonschema==3.2.0
    - jupyterlab-pygments==0.1.2
    - jupytext==1.6.0
    - kiwisolver==1.3.1
    - legacy-api-wrap==1.2
    - llvmlite==0.35.0
    - markdown-it-py==0.5.8
    - matplotlib==3.3.4
    - mistune==0.8.4
    - natsort==7.1.1
    - nbclient==0.5.2
    - nbconvert==5.6.1
    - nbformat==5.1.2
    - nest-asyncio==1.5.1
    - networkx==2.5
    - numba==0.52.0
    - numexpr==2.7.2
    - numpy==1.19.5
    - packaging==20.9
    - pandas==1.2.1
    - pandocfilters==1.4.3
    - pathlib2==2.3.5
    - patsy==0.5.1
    - pillow==8.1.0
    - plotly==4.8.1
    - pluggy==0.13.1
    - py==1.10.0
    - pyarrow==1.0.1
    - pyparsing==2.4.7
    - pyrsistent==0.17.3
    - pytest==6.2.2
    - pytz==2020.5
    - pyyaml==5.4.1
    - requests==2.25.1
    - retrying==1.3.3
    - s3fs==0.4.2
    - s3transfer==0.3.4
    - scanpy==1.6.1
    - scikit-learn==0.24.1
    - scipy==1.6.0
    - seaborn==0.11.1
    - setuptools-scm==5.0.1
    - sinfo==0.3.1
    - sparse==0.11.2
    - sqlalchemy==1.3.22
    - statsmodels==0.12.1
    - stdlib-list==0.8.0
    - tables==3.6.1
    - testpath==0.4.4
    - threadpoolctl==2.1.0
    - tiledb==0.7.7
    - toml==0.10.2
    - toolz==0.11.1
    - tqdm==4.56.0
    - umap-learn==0.4.6
    - urllib3==1.25.11
    - webencodings==0.5.1
    - werkzeug==1.0.1
#    - r-ggh4x==0.1.2
#    - hdf5=1.10.6
#    - r-devtools=2.2.2