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Dockerfile
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## MODE Application: Dockerfile
## Last Updated: 2024_05_13
## Build with the "--no-cache" flag
# Install latest version of rocker image: base image for MODE
# Standalone version: code-registry.emsl.pnl.gov/multiomics-analyses/mode-app/standalone:1.1.0
#FROM code-registry.emsl.pnl.gov/multiomics-analyses/mode-app/base:1.0.3
# Add dependency for new trelliscope
#RUN apt-get update
#RUN apt-get install -y libmagick++-6.q16-dev
#RUN Rscript -e "devtools::install_github('trelliscope/trelliscope')"
#RUN Rscript -e "devtools::install_github('yang-tang/shinyjqui')"
#RUN Rscript -e "devtools::install_github('daattali/shinycssloaders')"
# Install latest pmartR
#RUN Rscript -e "remotes::install_github('pmartR/pmartR@latest_trelliscope_package')"
# Copy directories into /srv/shiny-server
FROM code-registry.emsl.pnl.gov/multiomics-analyses/mode-app/standalone:1.2.3
WORKDIR /srv/shiny-server
COPY . .
EXPOSE 5600
# Launch App
CMD ["R", "-e", "shiny::runApp('/srv/shiny-server/', host = '0.0.0.0', port = 5600, launch.browser = FALSE)"]