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Issues list

Docs/CLI should list recombination maps in reverse time
#69 opened May 7, 2019 by jeromekelleher updated May 7, 2019
More informative attribute output for Python interface
#198 opened Nov 26, 2019 by gtsambos updated Nov 26, 2019
Add --years option to CLI
#75 opened May 14, 2019 by jeromekelleher updated Dec 10, 2019
util.is_valid_species_name only supports two words
#329 opened Dec 14, 2019 by jeromekelleher updated Dec 17, 2019
[Enhancement] Add error/noise processes to the simulation.
#339 opened Dec 17, 2019 by reedacartwright updated Dec 18, 2019
Recombination map metadata - which reference build?
#422 opened Mar 18, 2020 by hyanwong updated Mar 18, 2020
add a section in the docs about CI and RTD integration
#505 opened Apr 30, 2020 by grahamgower updated Apr 30, 2020
Simulating model parameters from priors enhancement New feature or request
#299 opened Dec 9, 2019 by gtsambos updated Apr 30, 2020
What to do when our sims don't line up with data?
#557 opened Jun 9, 2020 by andrewkern updated Jun 11, 2020
Improving diversity in our team help wanted Extra attention is needed
#598 opened Oct 1, 2020 by andrewkern updated Oct 18, 2020
Add CONTRIBUTING.md enhancement New feature or request
#634 opened Oct 18, 2020 by jashapiro updated Oct 19, 2020
Human genetic map not working as intended
#663 opened Oct 28, 2020 by Rosemeis updated Oct 29, 2020
Docs: masking problematic regions docs Improvements to documentation
#672 opened Oct 30, 2020 by agladstein updated Oct 30, 2020
start an FAQ page in the docs docs Improvements to documentation good first issue Good for newcomers
#671 opened Oct 30, 2020 by grahamgower updated Oct 30, 2020
Docs: PCA tutorial docs Improvements to documentation
#673 opened Oct 30, 2020 by agladstein updated Nov 2, 2020
audit "noqa" comments
#682 opened Nov 3, 2020 by grahamgower updated Nov 4, 2020
docker image
#674 opened Oct 30, 2020 by agladstein updated Nov 4, 2020
transition liftOver maintanance code to use concurrent.futures
#693 opened Nov 17, 2020 by jradrion updated Nov 17, 2020
add print_citations to engine.simulate enhancement New feature or request
#705 opened Dec 7, 2020 by petrelharp updated Dec 7, 2020
List available DemographicModels when non-existent one accessed enhancement New feature or request
#753 opened Feb 1, 2021 by hyanwong updated Feb 1, 2021
The --bibtex-file option seems prone to failure
#756 opened Feb 8, 2021 by grahamgower updated Feb 22, 2021
Plasmodium falciparum enhancement New feature or request Species Issues relating to species data in the catalog
#818 opened Mar 26, 2021 by ShyamieG updated Apr 8, 2021
Plasmodium vivax enhancement New feature or request Species Issues relating to species data in the catalog
#817 opened Mar 26, 2021 by ShyamieG updated Apr 8, 2021
Converting recombination maps to Zarr
#851 opened Apr 8, 2021 by jeromekelleher updated Apr 8, 2021
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