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tweak tweak
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MattWellie committed Nov 1, 2024
1 parent 7bad44d commit 308d5bd
Showing 1 changed file with 5 additions and 3 deletions.
8 changes: 5 additions & 3 deletions images/talos/Dockerfile
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
FROM python:3.10-bullseye
FROM python:3.12-bullseye


ARG VERSION=${VERSION:-6.1.2}
Expand All @@ -19,7 +19,7 @@ RUN apt update && apt install -y --no-install-recommends \
rm -r /var/cache/apt/*

# install a skinny version of gcloud
# gcloud is a monster - contains thousnds of man pages, a whole python installation, etc.0
# gcloud is a monster - contains thousands of man pages, a whole python installation, etc.0
# gcloud-lite is a much smaller version, with only the bits we need
# gcloud-go would be even smaller, but I couldn't grok the install
ADD https://github.com/tonymet/gcloud-lite/releases/download/472.0.0/google-cloud-cli-472.0.0-linux-x86_64-lite.tar.gz gcloud.tar.gz
Expand All @@ -28,11 +28,13 @@ RUN tar -zxf gcloud.tar.gz \
&& rm gcloud.tar.gz

ENV PATH="$PATH:/bin/google-cloud-sdk/bin"
ENV CLOUDSDK_PYTHON="/usr/local/bin/python"

# install nextflow
ADD https://get.nextflow.io nextflow
RUN chmod +x nextflow && \
mv nextflow /usr/bin && \
nextflow self-update

RUN pip install --no-cache-dir metamist git+https://github.com/populationgenomics/talos.git@${VERSION}
# botocore is required for the Gcloud CLI
RUN pip install --no-cache-dir botocore metamist git+https://github.com/populationgenomics/talos.git@${VERSION}

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