From 30fe2545447255eb5901434e5de80ff6f176fd39 Mon Sep 17 00:00:00 2001
From: Michael Harper <michael.harper@populationgenomics.org.au>
Date: Wed, 11 Dec 2024 14:01:14 +1100
Subject: [PATCH] First attempt at Dockerfile

---
 images.toml           |  1 +
 images/ica/Dockerfile | 15 +++++++++++++++
 2 files changed, 16 insertions(+)
 create mode 100644 images/ica/Dockerfile

diff --git a/images.toml b/images.toml
index 93f47ee3..121eeb08 100644
--- a/images.toml
+++ b/images.toml
@@ -20,6 +20,7 @@ gatk-sv_issue_661 = 'n_a'
 gcta = '1.94.1'
 hap-py = '0.3.15'
 haplocheckcli = '64293b3481d52025a01a293f6cc891546c30660e'
+ica = '2.31.0'
 jasmine = '1.1.5'
 mitoreport = '1.1.0'
 multipy = '0.16'
diff --git a/images/ica/Dockerfile b/images/ica/Dockerfile
new file mode 100644
index 00000000..7c32c46f
--- /dev/null
+++ b/images/ica/Dockerfile
@@ -0,0 +1,15 @@
+FROM debian:buster-slim
+
+ARG VERSION=${VERSION:-2.31.0}
+
+RUN apt-get update && apt-get install -y git wget bash bzip2 zip && \
+    rm -r /var/lib/apt/lists/* && \
+    rm -r /var/cache/apt/* && \
+    wget -q https://stratus-documentation-us-east-1-public.s3.amazonaws.com/cli/${VERSION}/ica-linux-amd64.sha256 -O /tmp/ica-linux-amd64.sha256 && \
+    wget -q https://stratus-documentation-us-east-1-public.s3.amazonaws.com/cli/${VERSION}/ica-linux-amd64.zip -O /tmp/ica-linux-amd64.zip && \
+    sed -i 's|/home/ec2-user/workspace/ontrolPlane_ICA_CLI_release_2.31/target/ica-linux-amd64.zip|/tmp/ica-linux-amd64.zip|' /tmp/ica-linux-amd64.sha256 \
+    sha256sum -c /tmp/ica-linux-amd64.sha256 && \
+    unzip -d /tmp /tmp/ica-linux-amd64.zip && \
+    cp /tmp/linux-amd64/icav2 /usr/local/bin/icav2 && \
+    chmod a+x /usr/local/bin/icav2 && \
+    rm -rf /tmp/ica-linux-amd64.sha256 /tmp/ica-linux-amd64.zip /tmp/linux-amd64
\ No newline at end of file