try changing micromamba download link

populationgenomics · Oct 31, 2024 · b55d99e · b55d99e
1 parent 884c8a8
commit b55d99e
Showing 1 changed file with 6 additions and 3 deletions.
diff --git a/images/trtools/Dockerfile b/images/trtools/Dockerfile
@@ -4,11 +4,14 @@ ENV MAMBA_ROOT_PREFIX /root/micromamba
 ENV PATH $MAMBA_ROOT_PREFIX/bin:$PATH
 ARG VERSION=${VERSION:-6.0.2}
 
-RUN apt-get update && apt-get install -y git wget bash bzip2 zip && \
+# Install necessary packages
+RUN apt-get update && apt-get install -y git curl bash bzip2 zip && \
     rm -r /var/lib/apt/lists/* && \
-    rm -r /var/cache/apt/* && \
-    wget -qO- https://api.anaconda.org/download/conda-forge/micromamba/0.8.2/linux-64/micromamba-0.8.2-he9b6cbd_0.tar.bz2 | tar -xvj -C /usr/local bin/micromamba && \
+    rm -r /var/cache/apt/*
+RUN curl -Ls https://micro.mamba.pm/api/micromamba/linux-64/latest | tar -xvj bin/micromamba && \
     mkdir ${MAMBA_ROOT_PREFIX} && \
     micromamba install -y --prefix ${MAMBA_ROOT_PREFIX} -c bioconda -c conda-forge \
     trtools=${VERSION} && \
     rm -r /root/micromamba/pkgs
+
+