From b96779ad7c5b339c4c5bb4bea79425f9a82e710f Mon Sep 17 00:00:00 2001
From: EddieLF <eddieformaini@gmail.com>
Date: Thu, 14 Sep 2023 13:35:01 +1000
Subject: [PATCH] ProjectsSummaryInternal model and test endpoint

---
 api/routes/web.py    | 46 +++++++++++++++++++++++++++++++++++++++++---
 models/models/web.py |  8 ++++----
 2 files changed, 47 insertions(+), 7 deletions(-)

diff --git a/api/routes/web.py b/api/routes/web.py
index 26a314313..5abbe24ae 100644
--- a/api/routes/web.py
+++ b/api/routes/web.py
@@ -17,7 +17,7 @@
 from db.python.layers.web import WebLayer, SearchItem
 from db.python.tables.project import ProjectPermissionsTable
 from models.models.search import SearchResponse
-from models.models.web import ProjectSummary, PagingLinks
+from models.models.web import ProjectsSummaryInternal, ProjectSummary, PagingLinks
 
 
 class SearchResponseModel(BaseModel):
@@ -126,10 +126,50 @@ async def sync_seqr_project(
 
 
 @router.post('/projects-summary', operation_id='getProjectsSummary')
-async def get_projects_summary(sequencing_types: list[str] = None):
+async def get_projects_summary(
+    projects: list[int] = None, sequencing_types: list[str] = None
+):
     """
-    Get the summary of all projects
+    Get the project summaries
     """
+    return [
+        ProjectsSummaryInternal(
+            project=1,
+            dataset='test-dataset-1',
+            sequencing_type='genome',
+            total_families=1,
+            total_participants=3,
+            total_samples=3,
+            total_sequencing_groups=3,
+            total_crams=3,
+            total_sgs_in_latest_es_index=3,
+            total_sgs_in_latest_annotate_dataset=3,
+        ),
+        ProjectsSummaryInternal(
+            project=1,
+            dataset='test-dataset-1',
+            sequencing_type='exome',
+            total_families=1,
+            total_participants=1,
+            total_samples=1,
+            total_sequencing_groups=1,
+            total_crams=1,
+            total_sgs_in_latest_es_index=1,
+            total_sgs_in_latest_annotate_dataset=1,
+        ),
+        ProjectsSummaryInternal(
+            project=2,
+            dataset='test-dataset-2',
+            sequencing_type='genome',
+            total_families=5,
+            total_participants=5,
+            total_samples=5,
+            total_sequencing_groups=5,
+            total_crams=4,
+            total_sgs_in_latest_es_index=4,
+            total_sgs_in_latest_annotate_dataset=4,
+        ),
+    ]
     return await WebLayer(get_projectless_db_connection).get_projects_summary(
         sequencing_types=sequencing_types
     )
diff --git a/models/models/web.py b/models/models/web.py
index 04fd173fc..23b2b934a 100644
--- a/models/models/web.py
+++ b/models/models/web.py
@@ -36,10 +36,10 @@ class ProjectsSummaryInternal:
     total_crams: int
     # latest_es_index_output: str
     # latest_es_index_timestamp: str
-    # total_sgs_in_latest_es_index: int
-    # latest_joint_call_output: str
-    # latest_joint_call_timestamp: str
-    # total_sgs_in_latest_joint_call: int
+    total_sgs_in_latest_es_index: int
+    # latest_annotate_dataset_output: str
+    # latest_annotate_dataset_timestamp: str
+    total_sgs_in_latest_annotate_dataset: int
 
 
 @dataclasses.dataclass