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CHANGELOG.md

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* `SortMeRNA v4.3.7` superseded `Sortmerna v2.1b`, which relies on Silva 138 and now produced even mates. Thank you @ekopylova and @biocodz for the support.
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* `Remove SynDNA reads` superseded `SynDNA Woltka`, which now generates even mates.
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* `Woltka v0.1.7, paired-end` superseded `Woltka v0.1.6` in `qp-woltka`; [more information](https://qiita.ucsd.edu/static/doc/html/processingdata/woltka_pairedend.html). Thank you to @qiyunzhu for the benchmarks!
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* Other general fixes, like [#3424](https://github.com/qiita-spots/qiita/pull/3424), [#3425](https://github.com/qiita-spots/qiita/pull/3425), [#3439](https://github.com/qiita-spots/qiita/pull/3439).
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* Other general fixes, like [#3424](https://github.com/qiita-spots/qiita/pull/3424), [#3425](https://github.com/qiita-spots/qiita/pull/3425), [#3439](https://github.com/qiita-spots/qiita/pull/3439), [#3440](https://github.com/qiita-spots/qiita/pull/3440).
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Version 2024.07

qiita_db/metadata_template/prep_template.py

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# artifacts that are archived are not returned as part of the code
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# above and we need to clean them before moving forward
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for aa in self.archived_artifacts():
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for aa in cls(id_).archived_artifacts():
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qdb.artifact.Artifact.delete(aa.id)
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# Delete the prep template filepaths

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