rust-bio-tools v0.23.0

Features

• New subcommand for plotting bam files (#156) (707ef77)

Version 0.22.0

Changed

• Revised rbt collapse-reads-to-fragments bam, CIGAR strings will now considered when merging reads (@FelixMoelder).

Version 0.21.1

Changed

• Further fixes for rbt vcf-report (@fxwiegand).

Version 0.21.0

Changed

• Small fixes for rbt vcf-report, e.g. for handling unexpected multiple canonical transcripts and eliminating the potential risk of receiving plots without any reads overlaying the variant when using --max-read-depth.

Version 0.20.5

Changed

• Bugfix for rbt vcf-report that stops displaying undefined values in the table-report.

Added

• New parameter --pin-until for rbt csv-report. --pin-until pins the table until the given column such that scrolling to the right does not hide the given column and those before.

Version 0.20.4

Changed

• Fixed a JS bug in VCF report leading to an error with empty annotation fields.

Version 0.20.3

Changed

• Cosmetic changes and bug fixes for rbt csv-report.

Version 0.20.2

Changed

• Cleaned up histogram presentation for pathologic columns.

Version 0.20.1

Changed

• Added button to highlight numeric values in column histogram (rbt csv-report).

Version 0.20.0

Added

• New parameter --formatter for rbt csv-report.
• --formatter allows the specification of custom formatting functions for one or multiple columns of the given csv file.