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Copy pathNrController.m
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330 lines (285 loc) · 11.7 KB
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classdef NrController < handle
properties
model
view
trialContrlArray
rootListener
importGui
end
methods
function self = NrController(mymodel)
self.model = mymodel;
self.view = NrView(mymodel,self);
% nFile = self.model.getNFile();
self.trialContrlArray = TrialController.empty;
% Listen to MATLAB root object for changing of current figure
self.rootListener = listener(groot,'CurrentFigure','PostSet',@self.selectTrial_Callback);
end
% function setLoadMovieOption(self,loadMovieOption)
% self.model.loadMovieOption = loadMovieOption;
% end
function loadExperiment(self,filePath)
foo = load(filePath);
fld = fieldnames(foo);
fld = fld{1};
if ismember(fld,{'myexp','self'})
model = foo.(fld);
model.trialArray = TrialModel.empty;
self.model = model;
self.view.model = self.model;
self.view.refreshView();
else
error('Invalid experiment file!')
end
end
function loadExperiment_Callback(self,src,evnt)
[fileName,fileDir] = uigetfile('*.mat',['Open ' ...
'Experiment']);
if fileName
filePath = fullfile(fileDir,fileName);
self.loadExperiment(filePath);
end
end
function newExperiment(self)
self.model = NrModel();
self.view.model = self.model;
self.view.refreshView();
end
function newExperiment_Callback(self,src,evnt)
self.newExperiment()
end
function importRawData_Callback(self,src,evnt)
self.importGui = gui.importRawDataGui(self.model);
end
function saveExperiment_Callback(self,src,evnt)
filePath = self.model.getDefaultFile('experiment');
[fileName,fileDir] = uiputfile(filePath,'Save experiment');
if fileName
filePath = fullfile(fileDir,fileName);
self.model.saveExperiment(filePath);
end
end
function expInfo_Callback(self,src,evnt)
tag = src.Tag;
propName = regex(tag,'Edit')
val = str2num(src.String);
self.model.expInfo.(propName) = val;
end
function addFilePath_Callback(self,filePath)
self.model.addFilePath(filePath);
end
function loadRangeGroup_Callback(self,src,evnt)
button = evnt.NewValue;
tag = button.Tag;
if strcmp(tag,'loadrange_radiobutton_2')
self.view.toggleLoadRangeText('on');
loadRange = self.view.getLoadRangeFromText();
self.model.loadMovieOption.zrange = loadRange;
else
self.view.toggleLoadRangeText('off');
self.model.loadMovieOption.zrange = 'all';
end
end
function loadRangeText_Callback(self,src,evnt)
startText = self.view.guiHandles.loadRangeStartText;
endText = self.view.guiHandles.loadRangeEndText;
wdw = NrController.setCorrectWindow(startText,endText,src);
self.model.loadMovieOption.zrange = wdw;
end
function loadStepText_Callback(self,src,evnt)
stepStr = src.String;
nFramePerStep = str2num(stepStr);
self.model.loadMovieOption.nFramePerStep = nFramePerStep;
end
function loadFileTypeGroup_Callback(self,src,evnt)
button = evnt.NewValue;
tag = button.Tag;
if strcmp(tag,'loadfiletype_radio_1')
self.model.loadFileType = 'binned';
else
self.model.loadFileType = 'raw';
end
end
function planeNumText_Callback(self,src,evnt)
planeNumStr = src.String;
planeNum = str2num(planeNumStr);
self.model.planeNum = planeNum;
end
% Callbacks for dF/F map parameters
function resIntensityOffset_Callback(self,src,evnt)
intensityOffsetStr = src.String;
intensityOffset = str2num(intensityOffsetStr);
self.model.responseOption.offset= intensityOffset;
end
function resFZero_Callback(self,src,evnt)
startText = self.view.guiHandles.resFZeroStartText;
endText = self.view.guiHandles.resFZeroEndText;
wdw = NrController.setWindow(startText,endText,src);
self.model.responseOption.fZeroWindow = wdw;
end
function responseWindow_Callback(self,src,evnt)
startText = self.view.guiHandles.responseStartText;
endText = self.view.guiHandles.responseEndText;
wdw = NrController.setWindow(startText,endText,src);
self.model.responseOption.responseWindow = wdw;
end
function mapType = getMapTypeFromButton(self,hbutton,buttonType)
matched = regexp(hbutton.Tag,[buttonType '_(\w+)'], ...
'tokens'); %XXXX
if length(matched)
mapType = matched{1}{1};
else
mapType = '';
end
end
function addMapButton_Callback(self,src,evnt)
mapType = self.getMapTypeFromButton(src, ...
'addMapButton');
self.model.addMapCurrTrial(mapType)
end
function updateMapButton_Callback(self,src,evnt)
mapType = self.getMapTypeFromButton(src, ...
'updateMapButton');
self.model.updateMapCurrTrial(mapType)
end
% Callbacks for max dF/F map parameters
function rmaxIntensityOffset_Callback(self,src,evnt)
intensityOffsetStr = src.String;
intensityOffset = str2num(intensityOffsetStr);
self.model.responseMaxOption.offset= intensityOffset;
end
function rmaxFZero_Callback(self,src,evnt)
startText = self.view.guiHandles.rmaxFZeroStartText;
endText = self.view.guiHandles.rmaxFZeroEndText;
wdw = NrController.setWindow(startText,endText,src);
self.model.responseMaxOption.fZeroWindow = wdw;
end
function rmaxSlidingWindow_Callback(self,src,evnt)
sstr = src.String;
slidingWindowSize = str2num(sstr);
if slidingWindowSize <=0
errorStruct.message(['Sliding window size should be ' ...
'a positive integer']);
self.view.displayError(errorStruct);
return
end
% slidingWindowSize = round(slidingWindowSize);
self.model.responseMaxOption.slidingWindowSize = slidingWindowSize;
src.String = num2str(slidingWindowSize);
end
function selectTrial_Callback(self,src,evnt)
fig = evnt.AffectedObject.(src.Name);
if ~isempty(fig)
tag = fig.Tag;
trialTag = regexp(tag,'trial_([a-zA-Z0-9]+)_','tokens');
if ~isempty(trialTag)
self.model.selectTrial(trialTag{1}{1});
end
end
end
function trialDeleted_Callback(self,src,evnt)
trialTag = src.tag;
idx = self.model.getTrialIdx(trialTag);
self.model.selectTrial([]);
self.model.trialArray(idx) = [];
self.trialContrlArray(idx) = [];
end
function fileListBox_Callback(self,src,evnt)
fig = src.Parent;
if strcmp(fig.SelectionType,'open')
idx = src.Value;
% TODO specify load fileType in GUI
self.openTrialFromList(idx);
end
end
function openTrialFromList(self,fileIdx)
fileType = self.model.loadFileType;
planeNum = self.model.planeNum;
trial = self.model.loadTrialFromList(fileIdx,fileType,planeNum);
self.openTrialContrl(trial);
end
function openAdditionalTrial(self,filePath,varargin)
trial = self.model.loadAdditionalTrial(filePath,varargin{:});
self.openTrialContrl(trial);
end
function openTrialContrl(self,trial)
addlistener(trial,'trialDeleted',@self.trialDeleted_Callback);
trialContrl = TrialController(trial);
% trialContrl.setSyncTimeTrace(true);
self.trialContrlArray(end+1) = trialContrl;
trialContrl.raiseView();
mapsAfterLoading = self.model.mapsAfterLoading;
if length(mapsAfterLoading)
for k = 1:length(mapsAfterLoading)
mapType = mapsAfterLoading{k};
self.model.addMapCurrTrial(mapType);
end
end
if self.model.loadTemplateRoi
roiFilePath = self.model.roiTemplateFilePath;
trial.loadRoiArray(roiFilePath,'replace')
end
end
function raiseTrialView(self,ind)
trialController = self.trialControllerArray{ind};
trialController.raiseView();
end
function mainFigClosed_Callback(self,src,evnt)
for i=1:length(self.trialContrlArray)
trialContrl = self.trialContrlArray(i);
trialContrl.mainFigClosed_Callback(1,1);
end
self.view.deleteFigures();
delete(self.view);
delete(self.model)
delete(self)
end
function delete(self)
if isvalid(self.view)
self.view.deleteFigures();
delete(self.view)
end
end
end
methods (Static)
function wdw = setCorrectWindow(startText,endText,src)
% TODO when window is not integer
startStr = startText.String;
endStr = endText.String;
startFrameNum = round(str2num(startStr));
endFrameNum = round(str2num(endStr));
switch src.Tag
case startText.Tag
if startFrameNum < 1
startFramenNum = 1;
end
if startFrameNum > endFrameNum
startFrameNum = endFrameNum;
end
set(src,'String',num2str(startFrameNum));
case endText.Tag
if endFrameNum < startFrameNum
endFrameNum = startFrameNum;
end
set(src,'String',num2str(endFrameNum));
end
wdw = [startFrameNum endFrameNum];
end
function wdw = setWindow(startText,endText,src)
% TODO when window is not integer
startStr = startText.String;
endStr = endText.String;
% startFrameNum = round(str2num(startStr));
% endFrameNum = round(str2num(endStr));
startNum = str2num(startStr);
endNum = str2num(endStr);
switch src.Tag
case startText.Tag
set(src,'String',num2str(startNum));
case endText.Tag
set(src,'String',num2str(endNum));
end
wdw = [startNum endNum];
end
end
end