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Y25-188 - Create ESeq flowcell IO or reuse the existing IO for Element Aviti bulk sequencing to update MLWH #4731

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yoldas opened this issue Mar 12, 2025 · 0 comments
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Element Aviti Phase 3 Enhancement New feature or request Size: M Medium - medium effort & risk

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@yoldas
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yoldas commented Mar 12, 2025

User story

As a developer, Abdullah, I would like to create a new flowcell IO or reuse the existing flowcell IO for Element Aviti bulk sequencing to update MLWH eseq_flowcell table.

Who are the primary contacts for this story
Tom W.
Abdullah Y.

Who is the nominated tester for UAT
PSD and/or NPG

Acceptance criteria

Consider if these features can be featured flagged to decouple testing and deployment.
To be considered successful the solution must allow:

  • Sequencing batch generates message describing a flowcell for Element Aviti and they are recorded in eseq_flowcell table in the warehouse database.

Dependencies

This story is blocked by the following dependencies:

References
This story has a non-blocking relationship with:

  • #<issue_no.>
  • sanger/#<issue_no.>

Additional context

This story has been extracted from sanger/unified_warehouse#715 because we need to implement a new flowcell IO or reuse the existing to generate messages, however we need more understanding of sequencing requests for Element Aviti.

Deployment notes

If eseq_flowcell table in unified_warehouse needs additional migrations, the unified warehouse release will need to be deployed before sequencescape.

Add any other context or screenshots about the feature request here.

@yoldas yoldas added the Enhancement New feature or request label Mar 12, 2025
@psd-issuer psd-issuer bot changed the title Create ESeq flowcell IO or reuse the existing IO for Element Aviti bulk sequencing to update MLWH Y25-188 - Create ESeq flowcell IO or reuse the existing IO for Element Aviti bulk sequencing to update MLWH Mar 12, 2025
@yoldas yoldas transferred this issue from sanger/unified_warehouse Mar 12, 2025
@yoldas yoldas added Element Aviti Phase 3 Size: M Medium - medium effort & risk labels Mar 12, 2025
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Labels
Element Aviti Phase 3 Enhancement New feature or request Size: M Medium - medium effort & risk
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