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An Error is occured while reading FASTA file #3

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LuyaoRen opened this issue Dec 12, 2019 · 0 comments
Open

An Error is occured while reading FASTA file #3

LuyaoRen opened this issue Dec 12, 2019 · 0 comments

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@LuyaoRen
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I tried to run vbt mendelian on alibaba cloud using cromwell.
But it reported
Contig chr1 is not available in given FASTA file! Contig chr2 is not available in given FASTA file! Contig chr3 is not available in given FASTA file! Contig chr4 is not available in given FASTA file! Contig chr5 is not available in given FASTA file! Contig chr6 is not available in given FASTA file! Contig chr7 is not available in given FASTA file! Contig chr8 is not available in given FASTA file! Contig chr9 is not available in given FASTA file! Contig chr10 is not available in given FASTA file! Contig chr11 is not available in given FASTA file! Contig chr12 is not available in given FASTA file! Contig chr13 is not available in given FASTA file! Contig chr14 is not available in given FASTA file! Contig chr15 is not available in given FASTA file! Contig chr16 is not available in given FASTA file!
and
An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file An Error is occured while reading FASTA file
I can successfully run VBT on HPC.

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