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setup.sh
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#!/usr/bin/env bash
setup_hbt() {
# Runs the project setup, leading to a collection of environment variables starting with either
# - "CF_", for controlling behavior implemented by columnflow, or
# - "HBT_", for features provided by the analysis repository itself.
# Check the setup.sh in columnflow for documentation of the "CF_" variables. The purpose of all
# "HBT_" variables is documented below.
#
# The setup also handles the installation of the software stack via virtual environments, and
# optionally an interactive setup where the user can configure certain variables.
#
#
# Arguments:
# 1. The name of the setup. "default" (which is itself the default when no name is set)
# triggers a setup with good defaults, avoiding all queries to the user and the writing of
# a custom setup file. See "interactive_setup()" for more info.
#
#
# Optinally preconfigured environment variables:
# None yet.
#
#
# Variables defined by the setup and potentially required throughout the analysis:
# HBT_BASE
# The absolute analysis base directory. Used to infer file locations relative to it.
# HBT_SETUP
# A flag that is set to 1 after the setup was successful.
# prevent repeated setups
if [ "${HBT_SETUP}" = "1" ]; then
>&2 echo "the HH -> bbtautau analysis was already succesfully setup"
>&2 echo "re-running the setup requires a new shell"
return "1"
fi
#
# prepare local variables
#
local shell_is_zsh="$( [ -z "${ZSH_VERSION}" ] && echo "false" || echo "true" )"
local this_file="$( ${shell_is_zsh} && echo "${(%):-%x}" || echo "${BASH_SOURCE[0]}" )"
local this_dir="$( cd "$( dirname "${this_file}" )" && pwd )"
local orig="${PWD}"
local setup_name="${1:-default}"
local setup_is_default="false"
[ "${setup_name}" = "default" ] && setup_is_default="true"
#
# global variables
# (HBT = hh2bbtautau, CF = columnflow)
#
# start exporting variables
export HBT_BASE="${this_dir}"
export CF_BASE="${this_dir}/modules/columnflow"
export CF_REPO_BASE="${HBT_BASE}"
export CF_REPO_BASE_ALIAS="HBT_BASE"
export CF_SETUP_NAME="${setup_name}"
# load cf setup helpers
CF_SKIP_SETUP="1" source "${CF_BASE}/setup.sh" "" || return "$?"
# interactive setup
if [ "${CF_REMOTE_JOB}" != "1" ]; then
cf_setup_interactive_body() {
# start querying for variables
query CF_CERN_USER "CERN username" "$( whoami )"
export_and_save CF_CERN_USER_FIRSTCHAR "\${CF_CERN_USER:0:1}"
query CF_DATA "Local data directory" "\$HBT_BASE/data" "./data"
query CF_STORE_NAME "Relative path used in store paths (see next queries)" "hbt_store"
query CF_STORE_LOCAL "Default local output store" "\$CF_DATA/\$CF_STORE_NAME"
query CF_WLCG_CACHE_ROOT "Local directory for caching remote files" "" "''"
export_and_save CF_WLCG_USE_CACHE "$( [ -z "${CF_WLCG_CACHE_ROOT}" ] && echo false || echo true )"
export_and_save CF_WLCG_CACHE_CLEANUP "${CF_WLCG_CACHE_CLEANUP:-false}"
query CF_SOFTWARE_BASE "Local directory for installing software" "\$CF_DATA/software"
query CF_JOB_BASE "Local directory for storing job files" "\$CF_DATA/jobs"
query CF_VOMS "Virtual-organization" "cms"
query CF_LOCAL_SCHEDULER "Use a local scheduler for law tasks" "True"
if [ "${CF_LOCAL_SCHEDULER}" != "True" ]; then
query CF_SCHEDULER_HOST "Address of a central scheduler for law tasks" "naf-cms15.desy.de"
query CF_SCHEDULER_PORT "Port of a central scheduler for law tasks" "8082"
else
export_and_save CF_SCHEDULER_HOST "127.0.0.1"
export_and_save CF_SCHEDULER_PORT "8082"
fi
query HBT_BUNDLE_CMSSW "Install and bundle CMSSW sandboxes for job submission?" "True"
}
cf_setup_interactive "${CF_SETUP_NAME}" "${HBT_BASE}/.setups/${CF_SETUP_NAME}.sh" || return "$?"
fi
# continue the fixed setup
export CF_CONDA_BASE="${CF_CONDA_BASE:-${CF_SOFTWARE_BASE}/conda}"
export CF_VENV_BASE="${CF_VENV_BASE:-${CF_SOFTWARE_BASE}/venvs}"
export CF_CMSSW_BASE="${CF_CMSSW_BASE:-${CF_SOFTWARE_BASE}/cmssw}"
export CF_CI_JOB="$( [ "${GITHUB_ACTIONS}" = "true" ] && echo 1 || echo 0 )"
#
# common variables
#
cf_setup_common_variables || return "$?"
#
# minimal local software setup
#
cf_setup_software_stack "${CF_SETUP_NAME}" || return "$?"
# ammend paths that are not covered by the central cf setup
export PATH="${HBT_BASE}/bin:${PATH}"
export PYTHONPATH="${HBT_BASE}:${HBT_BASE}/modules/cmsdb:${PYTHONPATH}"
# initialze submodules
if [ -e "${HBT_BASE}/.git" ]; then
local m
for m in $( ls -1q "${HBT_BASE}/modules" ); do
cf_init_submodule "${HBT_BASE}" "modules/${m}"
done
fi
#
# law setup
#
export LAW_HOME="${HBT_BASE}/.law"
export LAW_CONFIG_FILE="${HBT_BASE}/law.nocert.cfg"
if which law &> /dev/null; then
# source law's bash completion scipt
source "$( law completion )" ""
# silently index
law index -q
fi
# finalize
export HBT_SETUP="1"
}
main() {
# Invokes the main action of this script, catches possible error codes and prints a message.
# run the actual setup
if setup_hbt "$@"; then
cf_color green "HH -> bbtautau analysis successfully setup"
return "0"
else
local code="$?"
cf_color red "setup failed with code ${code}"
return "${code}"
fi
}
# entry point
if [ "${HBT_SKIP_SETUP}" != "1" ]; then
main "$@"
fi