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While creating nf-pediatric, I encountered minor typos/errors in the module. I place a list here in case someone wants to fix them before I do:
Add a touch bounding_box.pkl in the stub of betcrop/cropvolume. (@arnaudbore)
For some reason, freesurfer/synthbet:1.6.0 did not work on both Mac and Linux, I changed it to freesurfer/freesurfer:7.4.1, and it worked fine. (@ThoumyreStanislas) It also works with freesurfer/synthstrip:1.5.
Add automatic shell detection and selection in image/powderaverage. (@gagnonanthony)
Fix the first_suffix argument in image/resample. (@gagnonanthony)
Add the correct prefix_topup in the stub section in the topup module. (@Manonedde)
Remove the .py extension in N4BiasFieldCorrection in the stub of preproc/n4. (@arnaudbore)
While creating
nf-pediatric
, I encountered minor typos/errors in the module. I place a list here in case someone wants to fix them before I do:touch bounding_box.pkl
in the stub ofbetcrop/cropvolume
. (@arnaudbore)freesurfer/synthbet:1.6.0
did not work on both Mac and Linux, I changed it tofreesurfer/freesurfer:7.4.1
, and it worked fine. (@ThoumyreStanislas) It also works withfreesurfer/synthstrip:1.5
.image/powderaverage
. (@gagnonanthony)first_suffix
argument inimage/resample
. (@gagnonanthony)prefix_topup
in the stub section in thetopup
module. (@Manonedde).py
extension inN4BiasFieldCorrection
in the stub ofpreproc/n4
. (@arnaudbore)reconst/frf
to the correct scil version. (@ThoumyreStanislas)ANTs
version inregistration/anattodwi
. (@gagnonanthony)registration/antsapplytransforms
+ fix version. (@gagnonanthony)segmentation/freesurferseg
versions. (@gagnonanthony)segmentation/fsreconall
versions. (@gagnonanthony)utils/extractb0
. (@Manonedde)The text was updated successfully, but these errors were encountered: