pyproject.toml

[build-system]
requires = ["poetry-core>=1.0.0"]
build-backend = "poetry.core.masonry.api"

[tool.poetry]
name = "sequanix"
version = "0.3.0"
description = "Sequanix is a graphical user interface (GUI) that can be used to run Snakemake workflows"
authors = ["Sequana Team"]
license = "BSD-3"
repository = "https://github.com/sequana/sequanix"
readme = "README.rst"
keywords = ["snakemake", "NGS", "sequana", "pipelines", "sequanix"]
classifiers = [
        "Development Status :: 5 - Production/Stable",
        "Intended Audience :: Education",
        "Intended Audience :: End Users/Desktop",
        "Intended Audience :: Developers",
        "Intended Audience :: Science/Research",
        "License :: OSI Approved :: BSD License",
        "Operating System :: POSIX :: Linux",
        "Programming Language :: Python :: 3.8",
        "Programming Language :: Python :: 3.9",
        "Programming Language :: Python :: 3.10",
        "Topic :: Software Development :: Libraries :: Python Modules",
        "Topic :: Scientific/Engineering :: Bio-Informatics",
        "Topic :: Scientific/Engineering :: Information Analysis",
]

packages = [
    {include = "sequanix"}
]


[tool.poetry.dependencies]
click-completion = "^0.5.2"
colorlog = "^6.7.0"
ipython = "^8.1"
python = ">=3.8,<3.13"
qtconsole = "^5.5.1"
pyside6 = "^6.6.1"
pyside6-essentials = "^6.6.1"
pyopengl = "^3.1.7"
pyopengl-accelerate = "^3.1.7"
sequana-pipetools = "^0.17.0"
snakemake = "^7.32.4"


[tool.poetry.scripts]
sequanix = "sequanix:main"


[tool.poetry.group.dev.dependencies]
black = "^23.7.0"
pytest = "^7.4.0"
mock = "^5.1.0"
pytest-mock = "^3.11.1"
pytest-cov = "^4.1.0"
pytest-qt = "^4.2.0"
coveralls = "^3.3.1"
sequana-fastqc = "^1.8.0"