diff --git a/docs/jats.md b/docs/jats.md index 7829353..5ec4f17 100644 --- a/docs/jats.md +++ b/docs/jats.md @@ -15,7 +15,7 @@ JATS XML Specifications/Recommendations: A corpus of JATS XML articles embodies a particular "dialect" of JATS XML. -Archived Corpora: +Publicly Archived Corpora of JATS XML: * **PMC XML**: [PubMed Central (PMC) Open Access Subset](https://www.ncbi.nlm.nih.gov/pmc/tools/openftlist/) * **eLife XML**: [eLife article XML repository](https://github.com/elifesciences/elife-article-xml) @@ -30,46 +30,79 @@ Non-archived Corpora: - + + - - + + + - - - - + + + + + - - + + + + + + + + + + + + + + + + + + + + + + + + + + + - + + - - - - - - + + + + + + + + +
XML Articles ParsedArticle RepositoryXML Parsing Context Software Language
PubMed Central (HTML generation)
PubMed Central? ?
Europe PMC (HTML generation)? full-text-xslJavaScript ? (and XSL)
PubMed CentralPubReader (discontinued 2024)PubReaderJavaScript + XSL
bioRxiv JATS XML to eLife Reviewed Preprints
Europe PMC HTML generationfull-text-xsl + closed-sourceXSL + JavaScript
Europe PMCinternal workflow after manuscript submission full-text-xsl + + xpub-epmc + XSL
eLife Reviewed Preprintsingestion of bioRxiv JATS XML Encoda TypeScript
Servers using Open Preprint Systems (OPS)?OPSPHP
Journals using Open Journal Systems (OJS)?OJSPHP
American Mathematical Society (AMS) articlesAmerican Mathematical Society (AMS) journalsinternal workflow [AMS texml-to-html](https://github.com/AmerMathSoc/texml-to-html) JavaScript
Articles of journals using Open Journal Systems (OJS)OJSPHP
Articles of some journals hosted by Centre MersenneSome journals hosted by Centre Mersenneingestion of article data and text into database MathDoc platform Python
?HTML generationpacktoolsPython + XSL
?HTML generation eLife Lens and derivatives JavaScript
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