From 27d7b708af50590c432239def6754ea9d163a1e0 Mon Sep 17 00:00:00 2001
From: Harsh Sinha <harsh.sinha@pitt.edu>
Date: Fri, 23 Feb 2024 11:28:40 -0500
Subject: [PATCH] Modify is_bids_file to ignore JSON with .bidsignore

---
 MRdataset/dicom_utils.py | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/MRdataset/dicom_utils.py b/MRdataset/dicom_utils.py
index abae5eb..6c64a30 100644
--- a/MRdataset/dicom_utils.py
+++ b/MRdataset/dicom_utils.py
@@ -29,7 +29,8 @@ def is_bids_file(filename: Union[str, Path]):
     # TODO: Add some criteria to skip certain files
     if 'derivatives' in str(filename):
         return False
-
+    if 'bidsignore' in str(filename):
+        return False
     # Regular expression pattern
     pattern = r'sub-[^_]+'
     # Extracting substring using regex