{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":18970036,"defaultBranch":"master","name":"smithlab_cpp","ownerLogin":"smithlabcode","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2014-04-20T17:46:44.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/7265986?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1719163073.0","currentOid":""},"activityList":{"items":[{"before":"d99fff90e310e69169502f230c8208809719169e","after":null,"ref":"refs/heads/formatting-all-sources","pushedAt":"2024-06-23T17:17:53.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"}},{"before":"41067cc1e763339a407009dea851f93eb05abb2d","after":"07acd80f5d3c4075e2e64ebfe4260421b0696ba8","ref":"refs/heads/master","pushedAt":"2024-06-23T17:17:50.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Merge pull request #49 from smithlabcode/formatting-all-sources\n\nReformatting all sources","shortMessageHtmlLink":"Merge pull request #49 from smithlabcode/formatting-all-sources"}},{"before":"505d18cbb9dece9daf9705ff6009271b07a3552b","after":"d99fff90e310e69169502f230c8208809719169e","ref":"refs/heads/formatting-all-sources","pushedAt":"2024-06-23T17:16:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Fixing bug in clang-format workflow","shortMessageHtmlLink":"Fixing bug in clang-format workflow"}},{"before":null,"after":"505d18cbb9dece9daf9705ff6009271b07a3552b","ref":"refs/heads/formatting-all-sources","pushedAt":"2024-06-23T17:12:24.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Running clang-format on all c++ source files","shortMessageHtmlLink":"Running clang-format on all c++ source files"}},{"before":"6b951d4a1de6464e1c0bc882297b313b61b00f78","after":null,"ref":"refs/heads/clang-format","pushedAt":"2024-06-23T16:59:18.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"}},{"before":"acecc271c536513334283c5ed2d86c015fca9824","after":"41067cc1e763339a407009dea851f93eb05abb2d","ref":"refs/heads/master","pushedAt":"2024-06-23T16:59:13.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Merge pull request #48 from smithlabcode/clang-format\n\nSource formatting with clang-format","shortMessageHtmlLink":"Merge pull request #48 from smithlabcode/clang-format"}},{"before":null,"after":"6b951d4a1de6464e1c0bc882297b313b61b00f78","ref":"refs/heads/clang-format","pushedAt":"2024-06-23T16:56:54.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Adding a workflow to check source code formatting for c++ files","shortMessageHtmlLink":"Adding a workflow to check source code formatting for c++ files"}},{"before":"d03eaaf0cfb3dd93de8ee50ab9c98db475915d73","after":null,"ref":"refs/heads/update-build-system","pushedAt":"2024-06-23T16:04:39.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"}},{"before":"ca5acc5bcd2a8755682b45c717505e640a1e816e","after":"acecc271c536513334283c5ed2d86c015fca9824","ref":"refs/heads/master","pushedAt":"2024-06-23T16:04:36.000Z","pushType":"pr_merge","commitsCount":5,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Merge pull request #47 from smithlabcode/update-build-system\n\nUpdating the build system","shortMessageHtmlLink":"Merge pull request #47 from smithlabcode/update-build-system"}},{"before":null,"after":"d03eaaf0cfb3dd93de8ee50ab9c98db475915d73","ref":"refs/heads/update-build-system","pushedAt":"2024-06-23T16:01:30.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Separating the user-configurable CXXFLAGS from the built-in AM_CXXFLAGS","shortMessageHtmlLink":"Separating the user-configurable CXXFLAGS from the built-in AM_CXXFLAGS"}},{"before":"cda9b72a21037075707ccff44ff52d09b8dbfb9d","after":null,"ref":"refs/heads/udpating-option-parser-for-descriptions","pushedAt":"2024-06-09T02:42:32.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"}},{"before":"a545b8c2934b9e76dc9e0bfbc7b8c114a80b0d03","after":"ca5acc5bcd2a8755682b45c717505e640a1e816e","ref":"refs/heads/master","pushedAt":"2024-06-09T02:42:28.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Merge pull request #46 from smithlabcode/udpating-option-parser-for-descriptions\n\nadding a raw mode for program descriptions","shortMessageHtmlLink":"Merge pull request #46 from smithlabcode/udpating-option-parser-for-d…"}},{"before":null,"after":"cda9b72a21037075707ccff44ff52d09b8dbfb9d","ref":"refs/heads/udpating-option-parser-for-descriptions","pushedAt":"2024-06-09T02:35:47.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"OptionParser.[ch]pp: Adding an option for the 'about' message to be unformatted, which assumes it is formatted within the calling code","shortMessageHtmlLink":"OptionParser.[ch]pp: Adding an option for the 'about' message to be u…"}},{"before":"261af09f20a9aad5aad254cbf9fff9c0b4adb6e4","after":null,"ref":"refs/heads/makefile-am-update","pushedAt":"2024-06-02T19:25:07.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"}},{"before":"7c1b1ab9c546ca062da8804d3c8c0a1bc1cf4b7a","after":"a545b8c2934b9e76dc9e0bfbc7b8c114a80b0d03","ref":"refs/heads/master","pushedAt":"2024-06-02T19:25:05.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Merge pull request #45 from smithlabcode/makefile-am-update\n\nUpdating Makefile.am","shortMessageHtmlLink":"Merge pull request #45 from smithlabcode/makefile-am-update"}},{"before":null,"after":"261af09f20a9aad5aad254cbf9fff9c0b4adb6e4","ref":"refs/heads/makefile-am-update","pushedAt":"2024-06-02T19:24:26.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Makefile.am: adding compiler options and warnings","shortMessageHtmlLink":"Makefile.am: adding compiler options and warnings"}},{"before":"005f38805e4f2621a3222a274052983fd6a04a84","after":"7c1b1ab9c546ca062da8804d3c8c0a1bc1cf4b7a","ref":"refs/heads/master","pushedAt":"2023-11-25T02:32:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"GenomicRegion.cpp: checking that file opens properly for bed format files","shortMessageHtmlLink":"GenomicRegion.cpp: checking that file opens properly for bed format f…"}},{"before":"2b2f64ca09a48b93b022273dd56fb36fec1ba9c7","after":"005f38805e4f2621a3222a274052983fd6a04a84","ref":"refs/heads/master","pushedAt":"2023-10-27T19:14:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"ProgressBar: the percent-percent as replacement for backslash percent was clearly not right. Now just one percent, and in a c++ string it won't have the problems the percent sign had when used in a possible template string in C","shortMessageHtmlLink":"ProgressBar: the percent-percent as replacement for backslash percent…"}},{"before":"69e38ed3f42a034e63385f359aa92ae08d3f295a","after":null,"ref":"refs/heads/silence-warnings-on-osx-clang","pushedAt":"2023-10-19T01:57:47.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"}},{"before":"f80f5f6cf38ae1af9acb4ba77330cd9d25d1de81","after":"2b2f64ca09a48b93b022273dd56fb36fec1ba9c7","ref":"refs/heads/master","pushedAt":"2023-10-19T01:57:43.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Merge pull request #44 from smithlabcode/silence-warnings-on-osx-clang\n\nSilence warnings on OSX clang","shortMessageHtmlLink":"Merge pull request #44 from smithlabcode/silence-warnings-on-osx-clang"}},{"before":null,"after":"69e38ed3f42a034e63385f359aa92ae08d3f295a","ref":"refs/heads/silence-warnings-on-osx-clang","pushedAt":"2023-10-19T01:49:18.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"smithlab_utils.hpp: fixing a non-standard escape sequence for percent symbol","shortMessageHtmlLink":"smithlab_utils.hpp: fixing a non-standard escape sequence for percent…"}},{"before":"acfde8d379e0b2615807df865e1d529401db2f75","after":"f80f5f6cf38ae1af9acb4ba77330cd9d25d1de81","ref":"refs/heads/master","pushedAt":"2023-10-05T01:12:32.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Merge branch 'master' of github.com:smithlabcode/smithlab_cpp","shortMessageHtmlLink":"Merge branch 'master' of github.com:smithlabcode/smithlab_cpp"}},{"before":"f4761332cc83c5b0f91295c4e38c622c6a9f9e84","after":"acfde8d379e0b2615807df865e1d529401db2f75","ref":"refs/heads/master","pushedAt":"2023-09-21T18:42:50.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"chromosome_utils.cpp: consolidating the implementation of extract_regions_chrom_fasta for GenomicRegion and SimpleGenomicRegion. Removing variable length array by replacing with a string and reading raw data into the dot data member of that string. This function is not tested and is currently not used in abismal or dnmtools but might still be used in rmap","shortMessageHtmlLink":"chromosome_utils.cpp: consolidating the implementation of extract_reg…"}},{"before":"5645567ba5046d1c5d3d1fa7c9fd4822b73dbdd6","after":"f4761332cc83c5b0f91295c4e38c622c6a9f9e84","ref":"refs/heads/master","pushedAt":"2023-09-21T18:39:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"smithlab_os.cpp: Using preprocessor directives to ensure that a variable only used in an assert only exists when the assert does","shortMessageHtmlLink":"smithlab_os.cpp: Using preprocessor directives to ensure that a varia…"}},{"before":"5b76fd535b699faa6358e483d7648656e7436bfb","after":"5645567ba5046d1c5d3d1fa7c9fd4822b73dbdd6","ref":"refs/heads/master","pushedAt":"2023-09-18T22:43:54.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Merge branch 'master' of github.com:smithlabcode/smithlab_cpp","shortMessageHtmlLink":"Merge branch 'master' of github.com:smithlabcode/smithlab_cpp"}},{"before":"9a43bb96bf8ced4a9eb38db4ce27c915f0b1441c","after":"5b76fd535b699faa6358e483d7648656e7436bfb","ref":"refs/heads/master","pushedAt":"2023-09-13T23:31:20.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Updating the docs to mention c++17","shortMessageHtmlLink":"Updating the docs to mention c++17"}},{"before":"e5f16a38ba8f64113554c7cbe17aab100959b7da","after":"9a43bb96bf8ced4a9eb38db4ce27c915f0b1441c","ref":"refs/heads/master","pushedAt":"2023-09-12T02:21:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Changing ProgressBar so the check for whether or not to output has one fewer arithmetic operation","shortMessageHtmlLink":"Changing ProgressBar so the check for whether or not to output has on…"}},{"before":"cbd35d31c94a110fe77da378fa01a15c00b03417","after":null,"ref":"refs/heads/warning","pushedAt":"2023-09-02T00:20:53.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"}},{"before":"1ec1ddad8abf03204ba8bb45432382d92c397b15","after":"e5f16a38ba8f64113554c7cbe17aab100959b7da","ref":"refs/heads/master","pushedAt":"2023-09-01T16:53:21.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Merge branch 'master' of github.com:smithlabcode/smithlab_cpp","shortMessageHtmlLink":"Merge branch 'master' of github.com:smithlabcode/smithlab_cpp"}},{"before":"4d58bd2287b186104fa6da7e93326ee89299a30e","after":"1ec1ddad8abf03204ba8bb45432382d92c397b15","ref":"refs/heads/master","pushedAt":"2023-08-27T21:59:43.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"andrewdavidsmith","name":"Andrew Smith","path":"/andrewdavidsmith","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7356801?s=80&v=4"},"commit":{"message":"Merge branch 'master' of github.com:smithlabcode/smithlab_cpp","shortMessageHtmlLink":"Merge branch 'master' of github.com:smithlabcode/smithlab_cpp"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEbNmZYQA","startCursor":null,"endCursor":null}},"title":"Activity · smithlabcode/smithlab_cpp"}