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Merge pull request #305 from stan-dev/ref-draws
Adding ref draws round 2b
2 parents ca01e30 + 8500e4c commit c2a4eb5

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‎posterior_database/posteriors/dogs-dogs.json‎

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{
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"name": "dogs-dogs",
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"keywords": ["arm book", "stan examples", "pathfinder paper"],
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"keywords": [
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"arm book",
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"stan examples",
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"pathfinder paper"
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],
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"urls": "https://github.com/stan-dev/example-models/tree/master/ARM/Ch.24",
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"model_name": "dogs",
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"data_name": "dogs",
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"reference_posterior_name": null,
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"reference_posterior_name": "dogs-dogs",
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"references": "gelman2006data",
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"dimensions": {
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"beta": 3

‎posterior_database/posteriors/nes_logit_data-nes_logit_model.json‎

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{
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"keywords": ["arm book"],
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"keywords": [
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"arm book"
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],
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"urls": "https://github.com/stan-dev/example-models/tree/master/ARM/Ch.5",
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"references": "gelman2006data",
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"dimensions": {
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"alpha": 1,
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"beta": 1
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},
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"reference_posterior_name": null,
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"reference_posterior_name": "nes_logit_data-nes_logit_model",
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"added_date": "2021-07-01",
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"added_by": "Kane Lindsay",
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"name": "nes_logit_data-nes_logit_model",

‎posterior_database/posteriors/wells_data-wells_dist.json‎

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{
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"keywords": ["arm book", "logistic regression"],
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"keywords": [
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"arm book",
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"logistic regression"
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],
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"urls": "https://github.com/stan-dev/example-models/tree/master/ARM/Ch.5",
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"references": "gelman2006data",
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"dimensions": {
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"beta": 2
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},
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"reference_posterior_name": null,
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"reference_posterior_name": "wells_data-wells_dist",
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"added_date": "2020-10-02",
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"added_by": "Phil Clemson",
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"name": "wells_data-wells_dist",

‎posterior_database/posteriors/wells_data-wells_dist100_model.json‎

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{
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"keywords": ["arm book", "logistic regression"],
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"keywords": [
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"arm book",
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"logistic regression"
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],
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"urls": "https://github.com/stan-dev/example-models/tree/master/ARM/Ch.5",
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"references": "gelman2006data",
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"dimensions": {
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"alpha": 1,
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"beta": 1
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},
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"reference_posterior_name": null,
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"reference_posterior_name": "wells_data-wells_dist100_model",
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"added_date": "2021-07-07",
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"added_by": "Kane Lindsay",
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"name": "wells_data-wells_dist100_model",

‎posterior_database/reference_posteriors/draws/draws/dogs-dogs.json.zip‎

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‎posterior_database/reference_posteriors/draws/draws/nes_logit_data-nes_logit_model.json.zip‎

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‎posterior_database/reference_posteriors/draws/draws/wells_data-wells_dist.json.zip‎

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‎posterior_database/reference_posteriors/draws/draws/wells_data-wells_dist100_model.json.zip‎

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‎posterior_database/reference_posteriors/draws/info/dogs-dogs.info.json‎

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{
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"name": "dogs-dogs",
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"inference": {
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"method": "stan_sampling",
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"method_arguments": {
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"chains": 10,
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"iter": 20000,
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"warmup": 10000,
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"thin": 10,
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"seed": 2544,
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"control": {
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"adapt_delta": 0.8
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}
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}
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},
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"diagnostics": {
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"diagnostics_information": {
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"names": ["beta[1]", "beta[2]", "beta[3]"]
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},
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"ndraws": 10000,
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"nchains": 10,
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"effective_sample_size_bulk": [9591.4148905058191, 9704.7972587579916, 9426.9623437726459],
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"effective_sample_size_tail": [9791.5696378644734, 9689.571740157513, 10001.459664001111],
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"r_hat": [0.999721673559926, 1.00002043175366, 1.0000439169065],
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"divergent_transitions": [0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
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"expected_fraction_of_missing_information": [2.10652788235528, 2.07964326807562, 2.0032385330797, 1.94637895460122, 2.03751426442169, 2.02000035535677, 2.08697998994052, 1.88651846700462, 2.11253436886765, 1.99787570321205],
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"mean_lag1_ac": [0.00935203940134141, 0.0118820745118194, 0.0120395211098497]
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},
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"checks_made": {
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"ndraws_is_10k": true,
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"nchains_is_gte_4": true,
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"r_hat_below_1_01": true,
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"efmi_above_0_2": true,
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"abs_mean_lag1_ac_below_0_05": true
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},
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"comments": null,
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"added_by": "Jakob Torgander",
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"added_date": "2025-08-22",
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"versions": {
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"cmdstan_version": "2.36.0",
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"r_Makevars": "\nCXX14FLAGS += -O3 -mtune=native -arch arm64 -ftemplate-depth-256\n",
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"r_version": "R version 4.5.1 (2025-06-13)",
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"r_session": "R version 4.5.1 (2025-06-13)\nPlatform: aarch64-apple-darwin20\nRunning under: macOS Sequoia 15.6\n\nMatrix products: default\nBLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib \nLAPACK: /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.12.1\n\nlocale:\n[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8\n\ntime zone: Europe/Stockholm\ntzcode source: internal\n\nattached base packages:\n[1] stats graphics grDevices utils datasets methods base \n\nother attached packages:\n [1] posteriordb_0.3.3 testthat_3.2.3 cmdstanr_0.9.0 devtools_2.4.5 usethis_3.1.0 jsonlite_2.0.0 posterior_1.6.1 lubridate_1.9.4 \n [9] forcats_1.0.0 stringr_1.5.1 dplyr_1.1.4 purrr_1.1.0 readr_2.1.5 tidyr_1.3.1 tibble_3.3.0 ggplot2_3.5.2 \n[17] tidyverse_2.0.0 \n\nloaded via a namespace (and not attached):\n [1] tidyselect_1.2.1 farver_2.1.2 fastmap_1.2.0 gh_1.5.0 tensorA_0.36.2.1 promises_1.3.3 digest_0.6.37 \n [8] timechange_0.3.0 mime_0.13 lifecycle_1.0.4 ellipsis_0.3.2 processx_3.8.6 magrittr_2.0.3 compiler_4.5.1 \n[15] rlang_1.1.6 sass_0.4.10 tools_4.5.1 yaml_2.3.10 data.table_1.17.8 knitr_1.50 htmlwidgets_1.6.4 \n[22] bit_4.6.0 pkgbuild_1.4.8 RColorBrewer_1.1-3 pkgload_1.4.0 abind_1.4-8 miniUI_0.1.2 withr_3.0.2 \n[29] desc_1.4.3 grid_4.5.1 urlchecker_1.0.1 profvis_0.4.0 xtable_1.8-4 scales_1.4.0 cli_3.6.5 \n[36] rmarkdown_2.29 crayon_1.5.3 generics_0.1.4 remotes_2.5.0 rstudioapi_0.17.1 tzdb_0.5.0 sessioninfo_1.2.3 \n[43] cachem_1.1.0 parallel_4.5.1 matrixStats_1.5.0 vctrs_0.6.5 hms_1.1.3 bit64_4.6.0-1 jquerylib_0.1.4 \n[50] glue_1.8.0 ps_1.9.1 distributional_0.5.0 stringi_1.8.7 gtable_0.3.6 later_1.4.2 pillar_1.11.0 \n[57] htmltools_0.5.8.1 brio_1.1.5 R6_2.6.1 rprojroot_2.1.0 vroom_1.6.5 evaluate_1.0.4 shiny_1.11.1 \n[64] backports_1.5.0 memoise_2.0.1 httpuv_1.6.16 bslib_0.9.0 Rcpp_1.1.0 checkmate_2.3.2 xfun_0.52 \n[71] fs_1.6.6 pkgconfig_2.0.3 "
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}
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}

‎posterior_database/reference_posteriors/draws/info/nes_logit_data-nes_logit_model.info.json‎

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{
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"name": "nes_logit_data-nes_logit_model",
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"inference": {
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"method": "stan_sampling",
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"method_arguments": {
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"chains": 10,
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"iter": 20000,
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"warmup": 10000,
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"thin": 10,
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"seed": 2544,
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"control": {
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"adapt_delta": 0.8
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}
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}
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},
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"diagnostics": {
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"diagnostics_information": {
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"names": ["alpha", "beta[1]"]
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},
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"ndraws": 10000,
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"nchains": 10,
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"effective_sample_size_bulk": [9842.1836467614012, 9845.7536740326595],
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"effective_sample_size_tail": [8985.8981714682832, 9142.6211564480636],
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"r_hat": [1.00047102288871, 1.0003484101157],
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"divergent_transitions": [0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
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"expected_fraction_of_missing_information": [2.05174021482605, 2.03280888276162, 1.92934061026709, 1.9590615138144, 2.05364810926277, 1.92288564079075, 1.87334319880212, 1.96029364010633, 1.87248308079772, 1.94346092342764],
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"mean_lag1_ac": [0.00620021000257061, 0.00705248901551149]
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},
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"checks_made": {
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"ndraws_is_10k": true,
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"nchains_is_gte_4": true,
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"r_hat_below_1_01": true,
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"efmi_above_0_2": true,
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"abs_mean_lag1_ac_below_0_05": true
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},
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"comments": null,
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"added_by": "Jakob Torgander",
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"added_date": "2025-08-22",
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"versions": {
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"cmdstan_version": "2.36.0",
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"r_Makevars": "\nCXX14FLAGS += -O3 -mtune=native -arch arm64 -ftemplate-depth-256\n",
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"r_version": "R version 4.5.1 (2025-06-13)",
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"r_session": "R version 4.5.1 (2025-06-13)\nPlatform: aarch64-apple-darwin20\nRunning under: macOS Sequoia 15.6\n\nMatrix products: default\nBLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib \nLAPACK: /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.12.1\n\nlocale:\n[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8\n\ntime zone: Europe/Stockholm\ntzcode source: internal\n\nattached base packages:\n[1] stats graphics grDevices utils datasets methods base \n\nother attached packages:\n [1] posteriordb_0.3.3 testthat_3.2.3 cmdstanr_0.9.0 devtools_2.4.5 usethis_3.1.0 jsonlite_2.0.0 posterior_1.6.1 lubridate_1.9.4 \n [9] forcats_1.0.0 stringr_1.5.1 dplyr_1.1.4 purrr_1.1.0 readr_2.1.5 tidyr_1.3.1 tibble_3.3.0 ggplot2_3.5.2 \n[17] tidyverse_2.0.0 \n\nloaded via a namespace (and not attached):\n [1] tidyselect_1.2.1 farver_2.1.2 fastmap_1.2.0 gh_1.5.0 tensorA_0.36.2.1 promises_1.3.3 digest_0.6.37 \n [8] timechange_0.3.0 mime_0.13 lifecycle_1.0.4 ellipsis_0.3.2 processx_3.8.6 magrittr_2.0.3 compiler_4.5.1 \n[15] rlang_1.1.6 sass_0.4.10 tools_4.5.1 yaml_2.3.10 data.table_1.17.8 knitr_1.50 htmlwidgets_1.6.4 \n[22] bit_4.6.0 pkgbuild_1.4.8 RColorBrewer_1.1-3 pkgload_1.4.0 abind_1.4-8 miniUI_0.1.2 withr_3.0.2 \n[29] desc_1.4.3 grid_4.5.1 urlchecker_1.0.1 profvis_0.4.0 xtable_1.8-4 scales_1.4.0 cli_3.6.5 \n[36] rmarkdown_2.29 crayon_1.5.3 generics_0.1.4 remotes_2.5.0 rstudioapi_0.17.1 tzdb_0.5.0 sessioninfo_1.2.3 \n[43] cachem_1.1.0 parallel_4.5.1 matrixStats_1.5.0 vctrs_0.6.5 hms_1.1.3 bit64_4.6.0-1 jquerylib_0.1.4 \n[50] glue_1.8.0 ps_1.9.1 distributional_0.5.0 stringi_1.8.7 gtable_0.3.6 later_1.4.2 pillar_1.11.0 \n[57] htmltools_0.5.8.1 brio_1.1.5 R6_2.6.1 rprojroot_2.1.0 vroom_1.6.5 evaluate_1.0.4 shiny_1.11.1 \n[64] backports_1.5.0 memoise_2.0.1 httpuv_1.6.16 bslib_0.9.0 Rcpp_1.1.0 checkmate_2.3.2 xfun_0.52 \n[71] fs_1.6.6 pkgconfig_2.0.3 "
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}
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}

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