test Noah workflow #9
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| # Test changes that have been pushed to the main branch | |
| name: Testing and Validation | |
| # Controls when the action will run. | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| workflow_dispatch: | |
| #env: | |
| # Obtained from https://docs.github.com/en/actions/using-github-hosted-runners/about-github-hosted-runners#supported-runners-and-hardware-resources | |
| # TODO: add something later that can check the runners for hyperthreading | |
| #LINUX_NUM_PROC_CORES: 2 | |
| #MACOS_NUM_PROC_CORES: 3 | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # Run general unit tests in linux environment | |
| test_unit: | |
| # The type of runner that the job will run on | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| fail-fast: false | |
| runs-on: ${{ matrix.os }} | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| - name: Checkout the commit | |
| uses: actions/checkout@v4 | |
| - name: Install NetCDF | |
| run: | | |
| if [ ${{ runner.os }} == 'Linux' ] | |
| then | |
| sudo apt-get update | |
| sudo apt-get install -y --fix-missing libnetcdf-dev libnetcdff-dev libnetcdf-c++4-1 libnetcdf-c++4-dev | |
| echo "NETCDF=/usr" >> $GITHUB_ENV | |
| elif [ ${{ runner.os }} == 'macOS' ] | |
| then | |
| brew install netcdf netcdf-cxx netcdf-fortran | |
| echo "LIBRARY_PATH=/usr/local/lib/:$LIBRARY_PATH" >> $GITHUB_ENV | |
| echo "LDFLAGS=-L/usr/local/lib" >> $GITHUB_ENV | |
| echo "INCLUDE=/usr/local/include" >> $GITHUB_ENV | |
| echo "NETCDF=/usr/local" >> $GITHUB_ENV | |
| fi | |
| # Build and run noah executable | |
| # noah-owp-modular's configure system has 5 options serving the need for different computer | |
| # servers and OS environment. The numbers 5 and 4 are appropriate for our computing enviroments. | |
| - name: Configure | |
| run: | | |
| if [ ${{ runner.os }} == 'Linux' ] | |
| then | |
| ./configure 5 | |
| elif [ ${{ runner.os }} == 'macOS' ] | |
| then | |
| sudo ln -s $(which gfortran-13) /usr/local/bin/gfortran | |
| ./configure 5 | |
| fi | |
| - name: Build and Run Standalone | |
| run: | | |
| make clean | |
| make | |
| cd run | |
| ./noah_owp_modular.exe namelist.input | |
| - name: Build and Run BMI test | |
| run: | | |
| make clean | |
| make testBMI | |
| cd test | |
| ./noahowp_test.exe ../run/namelist.input |