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test Noah workflow

test Noah workflow #13

# Test ngen-cfe integration
name: Ngen Integration Tests
# Controls when the action will run.
on:
push:
branches: [ main, dev, notreal ]
pull_request:
branches: [ main, dev, notreal ]
workflow_dispatch:
env:
# Obtained from https://docs.github.com/en/actions/using-github-hosted-runners/about-github-hosted-runners#supported-runners-and-hardware-resources
# TODO: add something later that can check the runners for hyperthreading
LINUX_NUM_PROC_CORES: 2
MACOS_NUM_PROC_CORES: 3
ASAN_OPTIONS: detect_leaks=false
# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
# Run general unit tests in linux environment
test_surfacebmi_plus_cfe:
# The type of runner that the job will run on
strategy:
matrix:
os: [ubuntu-latest, macos-latest]
fail-fast: false
runs-on: ${{ matrix.os }}
# Steps represent a sequence of tasks that will be executed as part of the job
steps:
# Checkout and build the noah-owp-modular
- name: Checkout the commit
uses: actions/checkout@v4
- name: Save noah-owp-modular to a Temp Directory
run: |
# Move files to appropriate temporary directory
mkdir ${{runner.temp}}/noah-owp-modular
mv ./* ${{runner.temp}}/noah-owp-modular
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
- name: checkout actions in another repo
uses: actions/checkout@v4
with:
repository: noaa-owp/ngen
- name: Build ISO C Fortran BMI
id: submod_build_2
uses: ./.github/actions/ngen-submod-build
with:
mod-dir: "extern/iso_c_fortran_bmi/"
- name: Build CFE
id: submod_build_3
uses: ./.github/actions/ngen-submod-build
with:
mod-dir: "extern/cfe/"
targets: "cfebmi"
- name: Build PET
id: submod_build_5
uses: ./.github/actions/ngen-submod-build
with:
mod-dir: "extern/evapotranspiration/evapotranspiration"
targets: "petbmi"
- name: Build SLoTH
id: submod_build_6
uses: ./.github/actions/ngen-submod-build
with:
mod-dir: "extern/sloth/"
targets: "slothmodel"
# Build Ngen and save some files
- name: Build Ngen
id: ngen_id1
uses: ./.github/actions/ngen-build
with:
targets: "ngen"
build-cores: ${{ env.LINUX_NUM_PROC_CORES }}
#is this required for this test?
bmi_c: 'ON'
bmi_fortran: 'ON'
timeout-minutes: 15
- name: Prepare to Build noah-owp-modular Library for Ngen
run: |
# Move files to appropriate directory to build noah-owp-modular library
rm -rf extern/noah-owp-modular/noah-owp-modular/*
mv ${{runner.temp}}/noah-owp-modular/* extern/noah-owp-modular/noah-owp-modular
- name: Build Noah-owp-modular Surfacebmi
id: submod_build_1
uses: ./.github/actions/ngen-submod-build
with:
mod-dir: " extern/noah-owp-modular/"
targets: "surfacebmi"
- name: Run Ngen Test
run: |
# Run ngen with topmodel with CFE
mv ${{ steps.ngen_id1.outputs.build-dir }} ./ngen-build/
inputfile='data/example_bmi_multi_realization_config.json'
./ngen-build/ngen ./data/catchment_data.geojson "cat-27" ./data/nexus_data.geojson "nex-26" $inputfile
# The following remove a post ngen build error likely related to the temporary files left over during the
# build process
- name: Re-checkout Ngen
uses: actions/checkout@v3
with:
repository: noaa-owp/ngen