test Noah workflow #13
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
# Test ngen-cfe integration | |
name: Ngen Integration Tests | |
# Controls when the action will run. | |
on: | |
push: | |
branches: [ main, dev, notreal ] | |
pull_request: | |
branches: [ main, dev, notreal ] | |
workflow_dispatch: | |
env: | |
# Obtained from https://docs.github.com/en/actions/using-github-hosted-runners/about-github-hosted-runners#supported-runners-and-hardware-resources | |
# TODO: add something later that can check the runners for hyperthreading | |
LINUX_NUM_PROC_CORES: 2 | |
MACOS_NUM_PROC_CORES: 3 | |
ASAN_OPTIONS: detect_leaks=false | |
# A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
jobs: | |
# Run general unit tests in linux environment | |
test_surfacebmi_plus_cfe: | |
# The type of runner that the job will run on | |
strategy: | |
matrix: | |
os: [ubuntu-latest, macos-latest] | |
fail-fast: false | |
runs-on: ${{ matrix.os }} | |
# Steps represent a sequence of tasks that will be executed as part of the job | |
steps: | |
# Checkout and build the noah-owp-modular | |
- name: Checkout the commit | |
uses: actions/checkout@v4 | |
- name: Save noah-owp-modular to a Temp Directory | |
run: | | |
# Move files to appropriate temporary directory | |
mkdir ${{runner.temp}}/noah-owp-modular | |
mv ./* ${{runner.temp}}/noah-owp-modular | |
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
- name: checkout actions in another repo | |
uses: actions/checkout@v4 | |
with: | |
repository: noaa-owp/ngen | |
- name: Build ISO C Fortran BMI | |
id: submod_build_2 | |
uses: ./.github/actions/ngen-submod-build | |
with: | |
mod-dir: "extern/iso_c_fortran_bmi/" | |
- name: Build CFE | |
id: submod_build_3 | |
uses: ./.github/actions/ngen-submod-build | |
with: | |
mod-dir: "extern/cfe/" | |
targets: "cfebmi" | |
- name: Build PET | |
id: submod_build_5 | |
uses: ./.github/actions/ngen-submod-build | |
with: | |
mod-dir: "extern/evapotranspiration/evapotranspiration" | |
targets: "petbmi" | |
- name: Build SLoTH | |
id: submod_build_6 | |
uses: ./.github/actions/ngen-submod-build | |
with: | |
mod-dir: "extern/sloth/" | |
targets: "slothmodel" | |
# Build Ngen and save some files | |
- name: Build Ngen | |
id: ngen_id1 | |
uses: ./.github/actions/ngen-build | |
with: | |
targets: "ngen" | |
build-cores: ${{ env.LINUX_NUM_PROC_CORES }} | |
#is this required for this test? | |
bmi_c: 'ON' | |
bmi_fortran: 'ON' | |
timeout-minutes: 15 | |
- name: Prepare to Build noah-owp-modular Library for Ngen | |
run: | | |
# Move files to appropriate directory to build noah-owp-modular library | |
rm -rf extern/noah-owp-modular/noah-owp-modular/* | |
mv ${{runner.temp}}/noah-owp-modular/* extern/noah-owp-modular/noah-owp-modular | |
- name: Build Noah-owp-modular Surfacebmi | |
id: submod_build_1 | |
uses: ./.github/actions/ngen-submod-build | |
with: | |
mod-dir: " extern/noah-owp-modular/" | |
targets: "surfacebmi" | |
- name: Run Ngen Test | |
run: | | |
# Run ngen with topmodel with CFE | |
mv ${{ steps.ngen_id1.outputs.build-dir }} ./ngen-build/ | |
inputfile='data/example_bmi_multi_realization_config.json' | |
./ngen-build/ngen ./data/catchment_data.geojson "cat-27" ./data/nexus_data.geojson "nex-26" $inputfile | |
# The following remove a post ngen build error likely related to the temporary files left over during the | |
# build process | |
- name: Re-checkout Ngen | |
uses: actions/checkout@v3 | |
with: | |
repository: noaa-owp/ngen |