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pre_commit_phase2.cu
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// Copyright Supranational LLC
// Licensed under the Apache License, Version 2.0, see LICENSE for details.
// SPDX-License-Identifier: Apache-2.0
#include <all_gpus.cpp>
#ifndef __CUDA_ARCH__
#include <sys/mman.h>
#include <sys/stat.h>
#include <fcntl.h>
#include <unistd.h>
#include <math.h>
#include "tree_builder.cu"
#include "parameters.cpp"
#include "thread_pool_t.hpp"
static const size_t page_size = sysconf(_SC_PAGE_SIZE);
std::string get_layer_file_name(const int layer_idx) {
return "/sc-02-data-layer-" + std::to_string(layer_idx + 1) + ".dat";
}
std::string get_tree_c_file_name(const int config_idx, const int configs) {
return "/sc-02-data-tree-c" +
(configs == 1 ? "" : "-" + std::to_string(config_idx)) + ".dat";
}
std::string get_tree_r_file_name(const int config_idx, const int configs) {
return "/sc-02-data-tree-r-last" +
(configs == 1 ? "" : "-" + std::to_string(config_idx)) + ".dat";
}
void read_file(const size_t file_size, fr_t* ptr, const std::string file_name,
const size_t offset = 0) {
int file = open(file_name.c_str(), O_RDONLY);
fr_t* file_ptr = reinterpret_cast<fr_t*>(mmap(NULL, file_size,
PROT_READ, MAP_PRIVATE, file, offset));
#pragma omp parallel for
for (size_t i = 0; i < file_size / sizeof(fr_t); i++) {
ptr[i] = file_ptr[i];
}
munmap(reinterpret_cast<char*>(file_ptr), file_size);
close(file);
}
void write_to_file(const std::string file_name, const fr_t* ptr,
const size_t len) {
int file = open(file_name.c_str(), O_CREAT | O_RDWR,
S_IRUSR | S_IWUSR | S_IRGRP | S_IWGRP);
posix_fallocate(file, 0, sizeof(fr_t) * len);
fr_t* file_ptr = reinterpret_cast<fr_t*>(mmap(NULL, sizeof(fr_t) * len,
PROT_WRITE, MAP_SHARED, file, 0));
#pragma omp parallel for
for (size_t i = 0; i < len; i++) {
fr_t tmp = ptr[i];
tmp.from();
file_ptr[i] = tmp;
}
munmap(reinterpret_cast<char*>(file_ptr), sizeof(fr_t) * len);
close(file);
}
inline void tree_c_prepare_data(fr_t* leaves, const size_t sector_size,
const int configs, const int config_idx,
const int layers, const int layer_idx,
const int batches, const int batch_idx,
std::string cache_path) {
size_t bytes_to_read = sector_size / configs / batches;
const size_t leaves_to_read = bytes_to_read / sizeof(fr_t);
size_t file_offset = (sector_size / configs) * config_idx +
bytes_to_read * batch_idx;
size_t fallback_offset = 0;
if (file_offset % page_size != 0) {
fallback_offset = file_offset / sizeof(fr_t);
file_offset = 0;
bytes_to_read = sector_size;
}
const std::string layer_file = cache_path + get_layer_file_name(layer_idx);
int file = open(layer_file.c_str(), O_RDONLY);
fr_t* file_ptr = reinterpret_cast<fr_t*>(mmap(NULL,
bytes_to_read, PROT_READ, MAP_PRIVATE, file, file_offset));
#pragma omp parallel for
for (size_t i = 0; i < leaves_to_read; i++) {
leaves[i * layers + layer_idx] = file_ptr[fallback_offset + i];
}
munmap(reinterpret_cast<char*>(file_ptr), bytes_to_read);
close(file);
}
void write_tree_c_to_disk(const int config_idx, const int configs,
const fr_t* digests, const size_t digests_len,
const size_t partial_digests_len,
const int batch_idx, const int batches,
const size_t _offset_start, const int tree_arity,
std::string output_path) {
const std::string output_file =
output_path + get_tree_c_file_name(config_idx, configs);
int file = open(output_file.c_str(), O_CREAT | O_RDWR,
S_IRUSR | S_IWUSR | S_IRGRP | S_IWGRP);
if (batch_idx == 0)
posix_fallocate(file, 0, sizeof(fr_t) * digests_len);
size_t map_size =
digests_len == partial_digests_len ? digests_len : digests_len - 1;
fr_t* file_ptr = reinterpret_cast<fr_t*>(mmap(NULL,
sizeof(fr_t) * map_size, PROT_WRITE, MAP_SHARED, file, 0));
if (digests_len == partial_digests_len) {
#pragma omp parallel for
for (size_t i = 0; i < partial_digests_len; i++) {
fr_t tmp = digests[i];
tmp.from();
file_ptr[i] = tmp;
}
}
else {
#pragma omp parallel for
for (size_t i = 0; i < partial_digests_len; i++) {
size_t file_offset = 0;
size_t offset_end = i;
size_t offset_start = _offset_start;
while (offset_end >= offset_start / tree_arity) {
file_offset += offset_start;
offset_end %= offset_start / tree_arity;
offset_start /= tree_arity;
}
file_offset += offset_end + offset_start * batch_idx / batches;
fr_t tmp = digests[i];
tmp.from();
file_ptr[file_offset] = tmp;
}
}
munmap(reinterpret_cast<char*>(file_ptr), sizeof(fr_t) * map_size);
close(file);
}
void write_tree_c_root_to_disk(const int config_idx, const int configs,
const size_t digests_len, const fr_t& root,
std::string output_path) {
const std::string output_file =
output_path + get_tree_c_file_name(config_idx, configs);
int file = open(output_file.c_str(), O_RDWR);
fr_t* file_ptr = reinterpret_cast<fr_t*>(mmap(NULL,
sizeof(fr_t) * digests_len, PROT_WRITE, MAP_SHARED, file, 0));
fr_t tmp = root;
tmp.from();
file_ptr[digests_len - 1] = tmp;
munmap(reinterpret_cast<char*>(file_ptr), sizeof(fr_t) * digests_len);
close(file);
}
void tree_r_prepare_data(fr_t* leaves, const size_t sector_size,
const int configs, const int config_idx,
const int layers, std::string cache_path) {
size_t bytes_to_read = sector_size / configs;
const size_t leaves_to_read = bytes_to_read / sizeof(fr_t);
size_t file_offset = bytes_to_read * config_idx;
size_t fallback_offset = 0;
if (file_offset % page_size != 0) {
fallback_offset = file_offset / sizeof(fr_t);
file_offset = 0;
bytes_to_read = sector_size;
}
const std::string layer_file = cache_path + get_layer_file_name(layers - 1);
int file = open(layer_file.c_str(), O_RDONLY);
fr_t* file_ptr = reinterpret_cast<fr_t*>(mmap(NULL, bytes_to_read,
PROT_READ, MAP_PRIVATE, file, file_offset));
#pragma omp parallel for
for (size_t i = 0; i < leaves_to_read; i++) {
leaves[i] = file_ptr[fallback_offset + i];
}
munmap(reinterpret_cast<char*>(file_ptr), bytes_to_read);
close(file);
}
void write_tree_r_to_disk(const int config_idx, const int configs,
const fr_t* digests, const size_t digests_len,
std::string output_path) {
const std::string output_file =
output_path + get_tree_r_file_name(config_idx, configs);
write_to_file(output_file, digests, digests_len);
}
extern "C"
void pc2(const SectorParameters sector_parameters, fr_t* leaves, fr_t* digests,
fr_t* digests_r, fr_t roots[3],
std::string output_path, std::string cache_path) {
const gpu_t& gpu = select_gpu((size_t)0);
const size_t sector_size = sector_parameters.sector_size;
const int layers = sector_parameters.layers;
const int column_arity = sector_parameters.column_arity;
const int tree_arity = sector_parameters.tree_arity;
const int configs = sector_parameters.configs;
const int rows_to_discard = sector_parameters.rows_to_discard;
const size_t leaves_len = sector_size / sizeof(fr_t);
const size_t tree_c_leaves_len = leaves_len * layers / configs;
const size_t tree_r_leaves_len = leaves_len / configs;
ColumnTreeBuilder column_tree_builder(column_arity, tree_arity);
TreeBuilder tree_builder(tree_arity);
const size_t tree_c_digests_len =
column_tree_builder.calc_column_digests_len(tree_c_leaves_len,
column_arity, tree_arity);
const size_t tree_r_digests_len =
tree_builder.calc_digests_len(tree_r_leaves_len, tree_arity);
size_t batches = tree_arity;
size_t tree_c_batch_leaves_len = tree_c_leaves_len / batches;
size_t tree_c_batch_digests_len =
column_tree_builder.calc_column_digests_len(tree_c_batch_leaves_len,
column_arity, tree_arity);
size_t rows_to_discard_offset = 0;
for (size_t i = 0; i < rows_to_discard; i++) {
rows_to_discard_offset +=
tree_r_leaves_len / pow(static_cast<double>(tree_arity), i + 1);
}
fr_t* tree_c_2nd_last_row = (fr_t*)malloc(configs * sizeof(fr_t));
fr_t* tree_r_2nd_last_row = (fr_t*)malloc(configs * sizeof(fr_t));
fr_t* tree_c_merge = (fr_t*)malloc((batches * configs) * sizeof(fr_t));
channel_t<fr_t*> tree_c_memory_channel, tree_c_compute_channel;
channel_t<fr_t*> tree_r_memory_channel, tree_r_compute_channel;
channel_t<int> file_write_channel, all_complete;
gpu.spawn([&, leaves]() {
for (int batch_idx = 0; batch_idx < batches; batch_idx++) {
for (int layer_idx = 0; layer_idx < layers; layer_idx++) {
tree_c_prepare_data(
leaves + tree_c_batch_leaves_len * batch_idx,
sector_size,
configs,
0,
layers,
layer_idx,
batches,
batch_idx,
cache_path
);
}
tree_c_memory_channel.send(leaves + tree_c_batch_leaves_len * batch_idx);
}
for (int config_idx = 1; config_idx < configs; config_idx++) {
for (int batch_idx = 0; batch_idx < batches; batch_idx++) {
file_write_channel.recv();
for (int layer_idx = 0; layer_idx < layers; layer_idx++) {
tree_c_prepare_data(
leaves + tree_c_batch_leaves_len * batch_idx,
sector_size,
configs,
config_idx,
layers,
layer_idx,
batches,
batch_idx,
cache_path
);
}
tree_c_memory_channel.send(leaves +
tree_c_batch_leaves_len * batch_idx);
}
}
for (int batch_idx = 0; batch_idx < batches; batch_idx++)
file_write_channel.recv();
for (int config_idx = 0; config_idx < configs; config_idx++) {
tree_r_prepare_data(
leaves + tree_r_leaves_len * config_idx,
sector_size,
configs,
config_idx,
layers,
cache_path
);
tree_r_memory_channel.send(leaves + tree_r_leaves_len * config_idx);
}
});
gpu.spawn([&, leaves]() {
for (int config_idx = 0; config_idx < configs; config_idx++) {
for (int batch_idx = 0; batch_idx < batches; batch_idx++) {
fr_t* cur_leaves = tree_c_memory_channel.recv();
column_tree_builder.build_column_tree_with_preimages(
cur_leaves,
tree_c_batch_leaves_len,
digests + batch_idx * tree_c_batch_digests_len,
true
);
cudaDeviceSynchronize();
tree_c_merge[config_idx * batches + batch_idx] =
digests[batch_idx * tree_c_batch_digests_len +
tree_c_batch_digests_len - 1];
tree_c_compute_channel.send(digests +
batch_idx * tree_c_batch_digests_len);
}
}
for (int config_idx = 0; config_idx < configs; config_idx++) {
fr_t* current_leaves = tree_r_memory_channel.recv();
tree_builder.build_tree_with_preimages(
current_leaves,
tree_r_leaves_len,
digests_r + config_idx * tree_r_digests_len,
true
);
cudaDeviceSynchronize();
tree_r_2nd_last_row[config_idx] =
digests_r[config_idx * tree_r_digests_len + tree_r_digests_len - 1];
tree_r_compute_channel.send(digests_r + config_idx * tree_r_digests_len);
}
});
gpu.spawn([&, leaves]() {
for (int config_idx = 0; config_idx < configs; config_idx++) {
for (int batch_idx = 0; batch_idx < batches; batch_idx++) {
fr_t* cur_digests = tree_c_compute_channel.recv();
write_tree_c_to_disk(
config_idx,
configs,
cur_digests,
tree_c_digests_len,
tree_c_batch_digests_len,
batch_idx,
batches,
tree_c_leaves_len / column_arity,
tree_arity,
output_path
);
file_write_channel.send(0);
all_complete.send(0);
}
}
for (int config_idx = 0; config_idx < configs; config_idx++) {
fr_t* current_digests = tree_r_compute_channel.recv();
write_tree_r_to_disk(config_idx, configs,
current_digests + rows_to_discard_offset,
tree_r_digests_len - rows_to_discard_offset,
output_path);
all_complete.send(0);
}
});
for (int all_receive = 0; all_receive < configs * (batches + 1);
all_receive++)
all_complete.recv();
if (batches > 1) {
for (int config_idx = 0; config_idx < configs; config_idx++) {
fr_t tree_c_this_batch_root;
tree_builder.build_tree_with_preimages(
tree_c_merge + config_idx * batches,
batches,
&tree_c_2nd_last_row[config_idx],
false
);
write_tree_c_root_to_disk(
config_idx,
configs,
tree_c_digests_len,
tree_c_2nd_last_row[config_idx],
output_path
);
}
}
else {
for (int config_idx = 0; config_idx < configs; config_idx++) {
tree_c_2nd_last_row[config_idx] = tree_c_merge[config_idx];
}
}
if (configs > 1) {
TreeBuilder tree_builder_last(configs);
tree_builder_last.build_tree_with_preimages(
tree_c_2nd_last_row,
configs,
&roots[0],
false
);
tree_builder_last.build_tree_with_preimages(
tree_r_2nd_last_row,
configs,
&roots[1],
false
);
}
else {
roots[0] = tree_c_2nd_last_row[0];
roots[1] = tree_r_2nd_last_row[0];
}
TreeBuilder comm_r_builder(2);
comm_r_builder.build_tree_with_preimages(roots, 2, &roots[2], false);
free(tree_c_2nd_last_row);
free(tree_r_2nd_last_row);
free(tree_c_merge);
}
extern "C"
void test_output_data(const SectorParameters sector_parameters,
std::string output_path, std::string cache_path) {
const size_t sector_size = sector_parameters.sector_size;
const int layers = sector_parameters.layers;
const int column_arity = sector_parameters.column_arity;
const int tree_arity = sector_parameters.tree_arity;
const int configs = sector_parameters.configs;
const int rows_to_discard = sector_parameters.rows_to_discard;
const size_t leaves_len = sector_size / sizeof(fr_t);
// number of leaf nodes for one configs'th of tree C
const size_t tree_c_leaves_len = leaves_len * layers / configs;
const size_t tree_r_leaves_len = sector_size / sizeof(fr_t) / configs;
ColumnTreeBuilder column_tree_builder(column_arity, tree_arity);
TreeBuilder tree_builder(tree_arity);
size_t tree_c_digests_len =
column_tree_builder.calc_column_digests_len(tree_c_leaves_len,
column_arity, tree_arity);
size_t tree_r_digests_len =
tree_builder.calc_digests_len(tree_r_leaves_len, tree_arity);
size_t rows_to_discard_offset = 0;
for (size_t i = 0; i < rows_to_discard; i++) {
rows_to_discard_offset +=
tree_r_leaves_len / pow(static_cast<double>(tree_arity), i + 1);
}
tree_r_digests_len -= rows_to_discard_offset;
fr_t* _correct_ptr = (fr_t*)malloc(sizeof(fr_t) * tree_c_digests_len);
fr_t* _test_ptr = (fr_t*)malloc(sizeof(fr_t) * tree_c_digests_len);
for (int config_idx = 0; config_idx < configs; config_idx++) {
read_file(tree_c_digests_len * sizeof(fr_t), _correct_ptr,
cache_path + get_tree_c_file_name(config_idx, configs));
read_file(tree_c_digests_len * sizeof(fr_t), _test_ptr,
output_path + get_tree_c_file_name(config_idx, configs));
uint32_t* correct_ptr = reinterpret_cast<uint32_t*>(_correct_ptr);
uint32_t* test_ptr = reinterpret_cast<uint32_t*>(_test_ptr);
for (size_t i = 0;
i < tree_c_digests_len * sizeof(fr_t) / sizeof(uint32_t); i++) {
if (correct_ptr[i] != test_ptr[i]) {
printf("tree c failure at index %zu/%zu, config %d\n",
i / (sizeof(fr_t) / sizeof(uint32_t)),
i % (sizeof(uint32_t)), config_idx);
exit(2);
}
}
read_file(tree_r_digests_len * sizeof(fr_t), _correct_ptr,
cache_path + get_tree_r_file_name(config_idx, configs));
read_file(tree_r_digests_len * sizeof(fr_t), _test_ptr,
output_path + get_tree_r_file_name(config_idx, configs));
for (size_t i = 0; i < tree_r_digests_len; i++) {
if (correct_ptr[i] != test_ptr[i]) {
printf("tree r failure at index %zu/%zu, config %d\n",
i / (sizeof(fr_t) / sizeof(uint32_t)), i % (sizeof(uint32_t)),
config_idx);
exit(3);
}
}
}
free(_correct_ptr);
free(_test_ptr);
}
extern "C"
void allocate_pinned_memory(const SectorParameters sector_parameters,
fr_t*& main_ptr, fr_t*& digests_ptr,
fr_t*& digests_r_ptr) {
const size_t leaves_len = sector_parameters.sector_size / sizeof(fr_t);
const size_t tree_c_leaves_len = leaves_len *
sector_parameters.layers /
sector_parameters.configs;
const size_t tree_r_leaves_len = leaves_len / sector_parameters.configs;
cudaMallocHost(&main_ptr,
std::max(tree_c_leaves_len, leaves_len) * sizeof(fr_t));
ColumnTreeBuilder column_tree_builder(sector_parameters.column_arity,
sector_parameters.tree_arity);
TreeBuilder tree_builder(sector_parameters.tree_arity);
size_t tree_c_digests_len =
column_tree_builder.calc_column_digests_len(tree_c_leaves_len,
sector_parameters.column_arity,
sector_parameters.tree_arity);
size_t tree_r_digests_len =
tree_builder.calc_digests_len(tree_r_leaves_len,
sector_parameters.tree_arity);
cudaMallocHost(&digests_ptr, sizeof(fr_t) * tree_c_digests_len);
cudaMallocHost(&digests_r_ptr,
sizeof(fr_t) * tree_r_digests_len * sector_parameters.configs);
}
extern "C"
void free_pinned_memory(fr_t*& main_ptr, fr_t*& digests_ptr,
fr_t*& digests_r_ptr) {
cudaFreeHost(main_ptr);
cudaFreeHost(digests_ptr);
cudaFreeHost(digests_r_ptr);
}
#endif