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plot replicates against each other #34

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tischi opened this issue Oct 22, 2016 · 2 comments
Open

plot replicates against each other #34

tischi opened this issue Oct 22, 2016 · 2 comments

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@tischi
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tischi commented Oct 22, 2016

is this possible?

@tischi
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tischi commented Oct 22, 2016

measurement:
batch 1:
batch 2:
order by:

x <- htm@data$Count_Nuclei[which(htm@data$Metadata_plate=="EMBO_2012_Group1")]
y <- htm@data$Count_Nuclei[which(htm@data$Metadata_plate=="EMBO_2012_Group2")]
x_wellnum <- htm@data$Metadata_wellNum[which(htm@data$Metadata_plate=="EMBO_2012_Group1")]
y_wellnum <- htm@data$Metadata_wellNum[which(htm@data$Metadata_plate=="EMBO_2012_Group2")]
plot(x[order(x_order)], y[order(y_order)])

@tischi
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tischi commented Oct 22, 2016

htmCorrelationPlot(htm, "Metadata_wellNum", "Metadata_wellNum", "EMBO_2012_Group1", "EMBO_2012_Group2")

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