Repository for the Boutros Lab Delly Dockerfile, "an integrated structural variant (SV) prediction method that can discover, genotype and visualize deletions, tandem duplications, inversions and translocations at single-nucleotide resolution in short-read massively parallel sequencing data."
This image can be found in docker-Delly's GitHub package page here.
Delly GitHub repository here
| Tool | Version |
|---|---|
| Delly | 1.2.9 |
- Issue tracker to report errors and enhancement ideas.
- Discussions can take place in docker-Delly Discussions
- docker-Delly pull requests are also open for discussion
Please see list of Contributors at GitHub.
- Tobias Rausch, Thomas Zichner, Andreas Schlattl, Adrian M. Stuetz, Vladimir Benes, Jan O. Korbel. DELLY: structural variant discovery by integrated paired-end and split-read analysis. Bioinformatics. 2012 Sep 15;28(18):i333-i339. https://doi.org/10.1093/bioinformatics/bts378
Author: 'Timothy Sanders', 'Yu Pan', 'Mohammed Faizal Eeman Mootor'
docker-Delly is licensed under the GNU General Public License version 2. See the file LICENSE for the terms of the GNU GPL license.
docker-Delly can be used to create a docker instance to use the Delly tool.
Copyright (C) 2021-2024 University of California Los Angeles ("Boutros Lab") All rights reserved.
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.