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Alternative Way to Handle Trypsin Exception #821

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zhuchcn opened this issue Oct 26, 2023 · 0 comments
Open

Alternative Way to Handle Trypsin Exception #821

zhuchcn opened this issue Oct 26, 2023 · 0 comments
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enhancement New feature or request

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zhuchcn commented Oct 26, 2023

moPepGen currently isn't perfect for trypsin exceptions, especially 'RRH' and 'CRK'. Brought up by @lydiayliu, when calling for miscleavage peptides, we could do that with allowed misc +1, to include peptides with one more misc, and do our regex matching again to identify and discard those with +1 misc peptides.
@zhuchcn zhuchcn added the enhancement New feature or request label Oct 26, 2023
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