Changelog

All notable changes to tool-NFTest.

The format is based on Keep a Changelog.

This project adheres to Semantic Versioning.

[1.1.0] - 2024-07-08

Added

Validation of reference files

Changed

Make nftest run exit with the number of failed tests
Use shell=False for subprocess
Capture Nextflow logs via syslog rather than console
Format all code with ruff
Encapsulate NFTestAssert interface, rewrite tests

Fixed

Make nftest with no arguments print usage and exit
Resolve non-determinism in NFTestENV unit tests

[1.0.1] - 2024-01-05

Fixed

Path type passed to glob to identify files

[1.0.0] - 2023-10-23

Added

Support for patterns in expected and actual file paths

[1.0.0-rc.4] - 2023-10-04

Changed

Wrap all NextFlow output with real-time line-by-line log statements
Wrap custom comparison to log through NFTest logger
Add DEBUG lines about specific asserts
Assert that actual files are modified by pipelines

Fixed

Tests after real-time logging

[1.0.0-rc.3] - 2023-05-25

Fixed

Properly set default value of clean_logs according to case and global settings

[1.0.0-rc.2] - 2023-03-09

Added

Case name to output directory path to avoid over-writing
Support for Nextflow profiles

Changed

Override skip from configuration YAML for command line test cases

[1.0.0-rc.1] - 2022-12-01

Added

.env loading
Custom directory options
Logging
Tests

Changed

Document detailed options in README