Add labels for expected test resource consumption?

[nwiltsie]

This is a bit handwavy, but when coming in cold to a pipeline it would be nice to have some sense of:

• What system resources / node type the tests assume
• How long the tests are expected to run

Using pipeline-filter-RNAEditingSite as an example: the tests only require an F2, and the A-mini-N2 test takes < 1 minute while the A-full test takes >20 minutes, all of which is spent doing... something invisible to the logs?

2023-09-27 17:22:35,213 - NextFlow - INFO - executor >  local (6)
2023-09-27 17:22:35,213 - NextFlow - INFO - [ea/16b92d] process > run_validate_PipeVal (1)       [100%] 4 of 4 ✔
2023-09-27 17:22:35,213 - NextFlow - INFO - [61/4fd0ea] process > run_selectPositions_REDItools  [100%] 1 of 1 ✔
2023-09-27 17:22:35,213 - NextFlow - INFO - [ee/4756e1] process > run_AnnotateRepeatMasker_RE... [  0%] 0 of 1
2023-09-27 17:22:35,213 - NextFlow - INFO - [-        ] process > run_AnnotateGene_REDItools     -
2023-09-27 17:22:35,213 - NextFlow - INFO - [-        ] process > run_FilterREDIportal_REDItools -
2023-09-27 17:22:35,213 - NextFlow - INFO -
2023-09-27 17:22:35,213 - NextFlow - INFO -
2023-09-27 17:22:35,214 - NextFlow - INFO -
2023-09-27 17:22:35,214 - NextFlow - INFO -
2023-09-27 17:22:35,214 - NextFlow - INFO - Script time --> START: 27/09/2023 17:22:25
2023-09-27 17:22:35,214 - NextFlow - INFO - Reading table...
2023-09-27 17:22:35,214 - NextFlow - INFO - Total lines: 562210
2023-09-27 17:22:35,214 - NextFlow - INFO - Filtered in lines: 266815
2023-09-27 17:22:35,214 - NextFlow - INFO - Selected lines saved on CPCG0196-F1-A-full_candidates.txt
2023-09-27 17:42:03,998 - NextFlow - INFO - Script time --> END: 27/09/2023 17:22:34
2023-09-27 17:42:03,999 - NextFlow - INFO -
2023-09-27 17:42:04,000 - NextFlow - INFO -
2023-09-27 17:42:04,032 - NextFlow - INFO - executor >  local (6)
2023-09-27 17:42:04,033 - NextFlow - INFO - [ea/16b92d] process > run_validate_PipeVal (1)       [100%] 4 of 4 ✔
2023-09-27 17:42:04,033 - NextFlow - INFO - [61/4fd0ea] process > run_selectPositions_REDItools  [100%] 1 of 1 ✔
2023-09-27 17:42:04,033 - NextFlow - INFO - [ee/4756e1] process > run_AnnotateRepeatMasker_RE... [  0%] 0 of 1
2023-09-27 17:42:04,033 - NextFlow - INFO - [-        ] process > run_AnnotateGene_REDItools     -
2023-09-27 17:42:04,033 - NextFlow - INFO - [-        ] process > run_FilterREDIportal_REDItools -

Even just something like a free-form expected_duration field in the test config would be nice:

cases:
  - name: A-mini-n2
    nf_script: ./main.nf
    params_file: ./test/A-mini-n2.yaml
    skip: false
    verbose: true
    expected_duration: 1 minute on an F2