diff --git a/bolt/common/constants.py b/bolt/common/constants.py
index cfc6aa5..bc189ae 100644
--- a/bolt/common/constants.py
+++ b/bolt/common/constants.py
@@ -288,8 +288,10 @@ def namespace(self):
         'MANE|MANE_SELECT|MANE_PLUS_CLINICAL|TSL|APPRIS|CCDS|ENSP|SWISSPROT|TREMBL|UNIPARC|'
         'UNIPROT_ISOFORM|RefSeq|DOMAINS|HGVS_OFFSET|gnomADe_AF|gnomADe_AFR_AF|gnomADe_AMR_AF|'
         'gnomADe_ASJ_AF|gnomADe_EAS_AF|gnomADe_FIN_AF|gnomADe_MID_AF|gnomADe_NFE_AF|'
-        'gnomADe_REMAINING_AF|gnomADe_SAS_AF|CLIN_SIG|SOMATIC|PHENO|CHECK_REF|MOTIF_NAME|'
-        'MOTIF_POS|HIGH_INF_POS|MOTIF_SCORE_CHANGE|TRANSCRIPTION_FACTORS|NearestExonJB|'
+        'gnomADe_REMAINING_AF|gnomADe_SAS_AF|gnomADg_AF|gnomADg_AFR_AF|gnomADg_AMI_AF|'
+        'gnomADg_AMR_AF|gnomADg_ASJ_AF|gnomADg_EAS_AF|gnomADg_FIN_AF|gnomADg_MID_AF|'
+        'gnomADg_NFE_AF|gnomADg_REMAINING_AF|gnomADg_SAS_AF|CLIN_SIG|SOMATIC|PHENO|CHECK_REF|'
+        'MOTIF_NAME|MOTIF_POS|HIGH_INF_POS|MOTIF_SCORE_CHANGE|TRANSCRIPTION_FACTORS|NearestExonJB|'
         'MaxEntScan_alt|MaxEntScan_diff|MaxEntScan_ref'
     ),
     },
@@ -328,16 +330,7 @@ def namespace(self):
         'Number': '.',
         'Type': 'String',
         'Description': (
-            'Consequence annotations from Ensembl VEP. Format: Allele|Consequence|IMPACT|SYMBOL|'
-            'Gene|Feature_type|Feature|BIOTYPE|EXON|INTRON|HGVSc|HGVSp|cDNA_position|CDS_position|'
-            'Protein_position|Amino_acids|Codons|Existing_variation|ALLELE_NUM|DISTANCE|STRAND|'
-            'FLAGS|PICK|VARIANT_CLASS|SYMBOL_SOURCE|HGNC_ID|CANONICAL|MANE|MANE_SELECT|'
-            'MANE_PLUS_CLINICAL|TSL|APPRIS|CCDS|ENSP|SWISSPROT|TREMBL|UNIPARC|UNIPROT_ISOFORM|RefSeq|'
-            'DOMAINS|HGVS_OFFSET|gnomADe_AF|gnomADe_AFR_AF|gnomADe_AMR_AF|gnomADe_ASJ_AF|'
-            'gnomADe_EAS_AF|gnomADe_FIN_AF|gnomADe_MID_AF|gnomADe_NFE_AF|gnomADe_REMAINING_AF|'
-            'gnomADe_SAS_AF|CLIN_SIG|SOMATIC|PHENO|CHECK_REF|MOTIF_NAME|MOTIF_POS|HIGH_INF_POS|'
-            'MOTIF_SCORE_CHANGE|TRANSCRIPTION_FACTORS|NearestExonJB|MaxEntScan_alt|MaxEntScan_diff|'
-            'MaxEntScan_ref'
+            'Consequence annotations from Ensembl VEP. Format: Allele|Consequence|IMPACT|SYMBOL|Gene|Feature_type|Feature|BIOTYPE|EXON|INTRON|HGVSc|HGVSp|cDNA_position|CDS_position|Protein_position|Amino_acids|Codons|Existing_variation|ALLELE_NUM|DISTANCE|STRAND|FLAGS|PICK|VARIANT_CLASS|SYMBOL_SOURCE|HGNC_ID|CANONICAL|MANE|MANE_SELECT|MANE_PLUS_CLINICAL|TSL|APPRIS|CCDS|ENSP|SWISSPROT|TREMBL|UNIPARC|UNIPROT_ISOFORM|RefSeq|DOMAINS|HGVS_OFFSET|gnomADe_AF|gnomADe_AFR_AF|gnomADe_AMR_AF|gnomADe_ASJ_AF|gnomADe_EAS_AF|gnomADe_FIN_AF|gnomADe_MID_AF|gnomADe_NFE_AF|gnomADe_REMAINING_AF|gnomADe_SAS_AF|gnomADg_AF|gnomADg_AFR_AF|gnomADg_AMI_AF|gnomADg_AMR_AF|gnomADg_ASJ_AF|gnomADg_EAS_AF|gnomADg_FIN_AF|gnomADg_MID_AF|gnomADg_NFE_AF|gnomADg_REMAINING_AF|gnomADg_SAS_AF|CLIN_SIG|SOMATIC|PHENO|CHECK_REF|MOTIF_NAME|MOTIF_POS|HIGH_INF_POS|MOTIF_SCORE_CHANGE|TRANSCRIPTION_FACTORS|NearestExonJB|MaxEntScan_alt|MaxEntScan_diff|MaxEntScan_ref'
         ),
     },
 
diff --git a/bolt/workflows/other/cancer_report.py b/bolt/workflows/other/cancer_report.py
index 1902079..1f104b1 100644
--- a/bolt/workflows/other/cancer_report.py
+++ b/bolt/workflows/other/cancer_report.py
@@ -2,6 +2,7 @@
 
 
 import click
+import logging
 
 
 from ... import util
diff --git a/bolt/workflows/smlv_germline/report.py b/bolt/workflows/smlv_germline/report.py
index 395268f..224907b 100644
--- a/bolt/workflows/smlv_germline/report.py
+++ b/bolt/workflows/smlv_germline/report.py
@@ -4,11 +4,14 @@
 
 
 import click
+import logging
 
 
 from ... import util
 from ...common import pcgr
 
+logger = logging.getLogger(__name__)
+
 
 @click.command(name='report')
 @click.pass_context
diff --git a/bolt/workflows/smlv_somatic/report.py b/bolt/workflows/smlv_somatic/report.py
index ede90ca..0954cc3 100644
--- a/bolt/workflows/smlv_somatic/report.py
+++ b/bolt/workflows/smlv_somatic/report.py
@@ -7,11 +7,14 @@
 import click
 import cyvcf2
 import yaml
+import logging
 
 
 from ... import util
 from ...common import constants
 from ...common import pcgr
+from ...logging_config import setup_logging
+logger = logging.getLogger(__name__)
 
 
 @click.command(name='report')
@@ -129,6 +132,7 @@ def entry(ctx, **kwargs):
         output_dir,
     )
 
+    pcgr_output_dir = output_dir / 'pcgr'
     pcgr.run_somatic(
         pcgr_prep_fp,
         kwargs['pcgr_data_dir'],
diff --git a/docker/Dockerfile.pcgr b/docker/Dockerfile.pcgr
index ca984e8..2619305 100644
--- a/docker/Dockerfile.pcgr
+++ b/docker/Dockerfile.pcgr
@@ -15,13 +15,13 @@ RUN \
   conda create \
     --solver libmamba \
     --name pcgr \
-    --file https://raw.githubusercontent.com/sigven/pcgr/refs/tags/v2.2.1/conda/env/lock/pcgr-linux-64.lock
+    --file https://raw.githubusercontent.com/sigven/pcgr/refs/tags/v2.2.5/conda/env/lock/pcgr-linux-64.lock
 
 RUN \
   conda create \
     --solver libmamba \
     --name pcgrr \
-    --file https://raw.githubusercontent.com/sigven/pcgr/refs/tags/v2.2.1/conda/env/lock/pcgrr-linux-64.lock
+    --file https://raw.githubusercontent.com/sigven/pcgr/refs/tags/v2.2.5/conda/env/lock/pcgrr-linux-64.lock
 
 COPY ./conda/env/bolt_env.yml /tmp/
 RUN \