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panorama-examples

In this repository you will find code examples for working with data stored on a Panorama Server.

Panorama is a freely-available, open-source repository server application for targeted mass spectrometry assays that integrates into a Skyline mass spec workflow. It has been implemented as a module within LabKey Server, an open-source bioinformatics data management platform with extensive support for proteomics and small molecule data and a security model rich enough to support clinical studies.

The MacCoss Lab at the University of Washington hosts a public Panorama Server at https://panoramaweb.org.

Contents

  • files: Code examples for working with files stored on a Panorama Server
  • cromwell: Cromwell based pipelines (workflows)