run-tests.yml

name: Test

# runs on a push on main and at the end of every day
on:
  push:
    branches:
      - main
  schedule:
    - cron: '0 0 * * *'  # nightly

jobs:
  linux:
    runs-on: "ubuntu-latest"
    strategy:
      matrix:
        python-version: ["3.9", "3.10", "3.11", "3.12"]
      fail-fast: false
    name: Linux Python ${{ matrix.python-version }}
    steps:
      - uses: actions/checkout@v2
      - uses: conda-incubator/setup-miniconda@v2
        with:
          activate-environment: bgcval2
          environment-file: environment.yml
          python-version: ${{ matrix.python-version }}
          miniforge-version: "latest"
          use-mamba: true
      - shell: bash -l {0}
        run: conda --version
      - shell: bash -l {0}
        run: python -V
      - shell: bash -l {0}
        run: pip install -e .[develop]
      - shell: bash -l {0}
        run: |
          analysis_compare --help
          analysis_level3_amoc --help
          analysis_level3_dms --help
          analysis_level3_omz --help
          analysis_level3_sameYear --help
          analysis_p2p --help
          analysis_timeseries --help
          batch_timeseries --help
          bgcval2_make_report --help
          download_from_mass --help
      - shell: bash -l {0}
        run: pytest
      - shell: bash -l {0}
        run: sphinx-build -Ea doc doc/build