From 07ecc30ce0e13ff0a3111261724692e736585547 Mon Sep 17 00:00:00 2001 From: Lee de Mora Date: Mon, 27 Nov 2023 16:26:00 +0000 Subject: [PATCH] additional doc --- README.md | 10 +++++++++- 1 file changed, 9 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index a1b67328..a6ce9665 100644 --- a/README.md +++ b/README.md @@ -336,7 +336,15 @@ The command to run it is: batch_timeseries - y comparison_recipe.yml ``` -There is also an optional flag `-d` or `--dry_run` to test the batch_timeseries, +This will submit a time-series analysis for each job, using a command which looks like this: +``` +sbatch -J u-aa111 --error=logs/u-aa111.err --output=logs/u-aa111.out lotus_timeseries.sh u-aa111 kmf physics bgc +``` +The output and error messages will be in the `logs` directory which the jobID as the file prefix. +The job name on slurm will also be the jobID, so it's easy to tell which jobs are running. +The analysis suites will be apended as a list to the end of the command. + +There is also an optional flag `-d` or `--dry_run` to test `batch_timeseries`, which outputs the submission command to screen but does not submit the jobs. Note that this task does not run the `analysis_compare` suite so it will