-
Notifications
You must be signed in to change notification settings - Fork 0
/
4DNESI7DEJTM_processed_files_2021-09-18-15h-41m.tsv
We can make this file beautiful and searchable if this error is corrected: It looks like row 2 should actually have 10 columns, instead of 31 in line 1.
29 lines (29 loc) · 8.81 KB
/
4DNESI7DEJTM_processed_files_2021-09-18-15h-41m.tsv
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
### N.B.: File summary located at bottom of TSV file. Suggested command to download: cut -f 1 ./4DNESI7DEJTM_processed_files_2021-09-18-15h-41m.tsv | tail -n +3 | grep -v ^# | xargs -n 1 curl -O -L --user <access_key_id>:<access_key_secret>
File Download URL Experiment Set Accession Experiment Accession File Accession Size (MB) md5sum File Type File Format Bio Rep No Tech Rep No Biosource Type Organism Related File Relationship Related File Paired End Set Status File Status Publication Experiment Type Replicate Info Assay Details Biosource Dataset Condition In Experiment As Project Generating Lab Experimental Lab Contributing Lab Notes Open Data URL
https://data.4dnucleome.org/files-processed/4DNFI9G9FRJJ/@@download/4DNFI9G9FRJJ.pairs.gz 4DNESI7DEJTM 4DNEX8IKSYIC 4DNFI9G9FRJJ 6055.48 N/A contact list-replicate pairs 1 1 immortalized cell line human N/A N/A N/A released released Rao SS et al. (2014) in situ Hi-C Biorep 1, Techrep 1 MboI K562 Hi-C on K562 in situ Hi-C on K562 with MboI and bio-dATP (higher crosslinker concentration) processed file External 4DN DCIC, HMS Erez Lieberman Aiden, BCM N/A N/A https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/dfddedef-bb56-4179-8303-277300c7e8d5/4DNFI9G9FRJJ.pairs.gz
https://data.4dnucleome.org/files-processed/4DNFI9G9FRJJ/@@download/4DNFI9G9FRJJ.pairs.gz.px2 4DNESI7DEJTM 4DNEX8IKSYIC 4DNFI9G9FRJJ 25.46 b1a4800ad1a793f0562262526cf157e5 contact list-replicate pairs_px2 1 1 immortalized cell line human secondary file for 4DNFI9G9FRJJ N/A released released Rao SS et al. (2014) in situ Hi-C Biorep 1, Techrep 1 MboI K562 Hi-C on K562 in situ Hi-C on K562 with MboI and bio-dATP (higher crosslinker concentration) processed file External 4DN DCIC, HMS Erez Lieberman Aiden, BCM N/A N/A https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/dfddedef-bb56-4179-8303-277300c7e8d5/4DNFI9G9FRJJ.pairs.gz
https://data.4dnucleome.org/files-processed/4DNFI4DGNY7J/@@download/4DNFI4DGNY7J.pairs.gz 4DNESI7DEJTM 4DNEX8PBXPIN 4DNFI4DGNY7J 7088.61 N/A contact list-replicate pairs 1 2 immortalized cell line human N/A N/A N/A released released Rao SS et al. (2014) in situ Hi-C Biorep 1, Techrep 2 MboI K562 Hi-C on K562 in situ Hi-C on K562 with MboI and bio-dATP (higher crosslinker concentration) processed file External 4DN DCIC, HMS Erez Lieberman Aiden, BCM N/A N/A https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/c0d31291-e263-4d38-8542-a4e8998ca47d/4DNFI4DGNY7J.pairs.gz
https://data.4dnucleome.org/files-processed/4DNFI4DGNY7J/@@download/4DNFI4DGNY7J.pairs.gz.px2 4DNESI7DEJTM 4DNEX8PBXPIN 4DNFI4DGNY7J 25.36 7631a9f7ea7015aa5d3c887ec8ccaa05 contact list-replicate pairs_px2 1 2 immortalized cell line human secondary file for 4DNFI4DGNY7J N/A released released Rao SS et al. (2014) in situ Hi-C Biorep 1, Techrep 2 MboI K562 Hi-C on K562 in situ Hi-C on K562 with MboI and bio-dATP (higher crosslinker concentration) processed file External 4DN DCIC, HMS Erez Lieberman Aiden, BCM N/A N/A https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/c0d31291-e263-4d38-8542-a4e8998ca47d/4DNFI4DGNY7J.pairs.gz
https://data.4dnucleome.org/files-processed/4DNFIRHH2E7D/@@download/4DNFIRHH2E7D.pairs.gz 4DNESI7DEJTM 4DNEXH2JC926 4DNFIRHH2E7D 1210.73 N/A contact list-replicate pairs 2 1 immortalized cell line human N/A N/A N/A released released Rao SS et al. (2014) in situ Hi-C Biorep 2, Techrep 1 MboI K562 Hi-C on K562 in situ Hi-C on K562 with MboI and bio-dATP (higher crosslinker concentration) processed file External 4DN DCIC, HMS Erez Lieberman Aiden, BCM N/A N/A https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/62c1e496-3194-455e-80cf-9dd0a5802f3d/4DNFIRHH2E7D.pairs.gz
https://data.4dnucleome.org/files-processed/4DNFIRHH2E7D/@@download/4DNFIRHH2E7D.pairs.gz.px2 4DNESI7DEJTM 4DNEXH2JC926 4DNFIRHH2E7D 22.75 66595360e3efd26e7b64b0f26294c6ad contact list-replicate pairs_px2 2 1 immortalized cell line human secondary file for 4DNFIRHH2E7D N/A released released Rao SS et al. (2014) in situ Hi-C Biorep 2, Techrep 1 MboI K562 Hi-C on K562 in situ Hi-C on K562 with MboI and bio-dATP (higher crosslinker concentration) processed file External 4DN DCIC, HMS Erez Lieberman Aiden, BCM N/A N/A https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/62c1e496-3194-455e-80cf-9dd0a5802f3d/4DNFIRHH2E7D.pairs.gz
https://data.4dnucleome.org/files-processed/4DNFID8N3SCC/@@download/4DNFID8N3SCC.pairs.gz 4DNESI7DEJTM 4DNEX4QXTLZ9 4DNFID8N3SCC 1148.36 N/A contact list-replicate pairs 2 2 immortalized cell line human N/A N/A N/A released released Rao SS et al. (2014) in situ Hi-C Biorep 2, Techrep 2 MboI K562 Hi-C on K562 in situ Hi-C on K562 with MboI and bio-dATP (higher crosslinker concentration) processed file External 4DN DCIC, HMS Erez Lieberman Aiden, BCM N/A N/A https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/7cf40e22-0211-4805-b364-ccfcc5f2c85e/4DNFID8N3SCC.pairs.gz
https://data.4dnucleome.org/files-processed/4DNFID8N3SCC/@@download/4DNFID8N3SCC.pairs.gz.px2 4DNESI7DEJTM 4DNEX4QXTLZ9 4DNFID8N3SCC 22.59 bc336f9180bfe3f3621703341284fe7e contact list-replicate pairs_px2 2 2 immortalized cell line human secondary file for 4DNFID8N3SCC N/A released released Rao SS et al. (2014) in situ Hi-C Biorep 2, Techrep 2 MboI K562 Hi-C on K562 in situ Hi-C on K562 with MboI and bio-dATP (higher crosslinker concentration) processed file External 4DN DCIC, HMS Erez Lieberman Aiden, BCM N/A N/A https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/7cf40e22-0211-4805-b364-ccfcc5f2c85e/4DNFID8N3SCC.pairs.gz
https://data.4dnucleome.org/files-processed/4DNFIKFV5Y88/@@download/4DNFIKFV5Y88.pairs.gz 4DNESI7DEJTM 4DNEXC7SDGS9 4DNFIKFV5Y88 1113.09 N/A contact list-replicate pairs 2 3 immortalized cell line human N/A N/A N/A released released Rao SS et al. (2014) in situ Hi-C Biorep 2, Techrep 3 MboI K562 Hi-C on K562 in situ Hi-C on K562 with MboI and bio-dATP (higher crosslinker concentration) processed file External 4DN DCIC, HMS Erez Lieberman Aiden, BCM N/A N/A https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/1d5b9ec9-3829-49a2-9576-f4299166c938/4DNFIKFV5Y88.pairs.gz
https://data.4dnucleome.org/files-processed/4DNFIKFV5Y88/@@download/4DNFIKFV5Y88.pairs.gz.px2 4DNESI7DEJTM 4DNEXC7SDGS9 4DNFIKFV5Y88 22.38 a8cfd47a6ed340a9e86257dec4609298 contact list-replicate pairs_px2 2 3 immortalized cell line human secondary file for 4DNFIKFV5Y88 N/A released released Rao SS et al. (2014) in situ Hi-C Biorep 2, Techrep 3 MboI K562 Hi-C on K562 in situ Hi-C on K562 with MboI and bio-dATP (higher crosslinker concentration) processed file External 4DN DCIC, HMS Erez Lieberman Aiden, BCM N/A N/A https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/1d5b9ec9-3829-49a2-9576-f4299166c938/4DNFIKFV5Y88.pairs.gz
https://data.4dnucleome.org/files-processed/4DNFI7CIF2JL/@@download/4DNFI7CIF2JL.pairs.gz 4DNESI7DEJTM 4DNEX3CGGK34 4DNFI7CIF2JL 1224.33 N/A contact list-replicate pairs 2 4 immortalized cell line human N/A N/A N/A released released Rao SS et al. (2014) in situ Hi-C Biorep 2, Techrep 4 MboI K562 Hi-C on K562 in situ Hi-C on K562 with MboI and bio-dATP (higher crosslinker concentration) processed file External 4DN DCIC, HMS Erez Lieberman Aiden, BCM N/A N/A https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/b0d8efde-3d34-4c04-8fe5-71bcea2dfce2/4DNFI7CIF2JL.pairs.gz
https://data.4dnucleome.org/files-processed/4DNFI7CIF2JL/@@download/4DNFI7CIF2JL.pairs.gz.px2 4DNESI7DEJTM 4DNEX3CGGK34 4DNFI7CIF2JL 22.71 3b820951681241ddd5850045cfe95814 contact list-replicate pairs_px2 2 4 immortalized cell line human secondary file for 4DNFI7CIF2JL N/A released released Rao SS et al. (2014) in situ Hi-C Biorep 2, Techrep 4 MboI K562 Hi-C on K562 in situ Hi-C on K562 with MboI and bio-dATP (higher crosslinker concentration) processed file External 4DN DCIC, HMS Erez Lieberman Aiden, BCM N/A N/A https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/b0d8efde-3d34-4c04-8fe5-71bcea2dfce2/4DNFI7CIF2JL.pairs.gz
###
### Summary
###
### Files Selected for Download: 6
### Total File Rows: 12
### Unique Downloadable Files: 12
### - Added 6 extra files which are attached to a primary selected file (e.g. pairs_px2 index file with a pairs file):
### - Details: 4DNFI9G9FRJJ.pairs_px2 Secondary file for 4DNFI9G9FRJJ
### 4DNFI4DGNY7J.pairs_px2 Secondary file for 4DNFI4DGNY7J
### 4DNFIRHH2E7D.pairs_px2 Secondary file for 4DNFIRHH2E7D
### 4DNFID8N3SCC.pairs_px2 Secondary file for 4DNFID8N3SCC
### 4DNFIKFV5Y88.pairs_px2 Secondary file for 4DNFIKFV5Y88
### and 1 more...
###
### IMPORTANT: As of October 15, 2020, you must include an access key in your cURL command for bulk downloads. You can configure the access key in your profile. If you do not already have an account, you can log in with your Google or GitHub credentials.