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How to do plotting.TriangularMatrixPlot without ice balancing #194

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WenfanKK opened this issue Jul 22, 2024 · 1 comment
Open

How to do plotting.TriangularMatrixPlot without ice balancing #194

WenfanKK opened this issue Jul 22, 2024 · 1 comment

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@WenfanKK
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Hello,

I am trying to use tool to visualize some data from Capture HiC, and I realized that the regular ice balancing or ice transform for HiC is not compatible with these data type. Is there a parameter I can use to avoid such normalization in plotting? I use TriangularMatrixPlot mostly.

Thanks,

Wenfan

@WenfanKK
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example script and plot I use:
image

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