forked from intel/scikit-learn-intelex
-
Notifications
You must be signed in to change notification settings - Fork 0
/
setup.py
executable file
·429 lines (372 loc) · 15.1 KB
/
setup.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
#! /usr/bin/env python
#===============================================================================
# Copyright 2014-2021 Intel Corporation
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#===============================================================================
# System imports
import os
import sys
import time
from setuptools import setup, Extension
from os.path import join as jp
from distutils.sysconfig import get_config_vars
from Cython.Build import cythonize
import glob
import numpy as np
try:
from ctypes.utils import find_library
except ImportError:
from ctypes.util import find_library
IS_WIN = False
IS_MAC = False
IS_LIN = False
daal_root = os.environ.get('DAALROOT')
dal_root = os.environ.get('DALROOT')
if not dal_root:
dal_root = daal_root
if 'linux' in sys.platform:
IS_LIN = True
lib_dir = jp(dal_root, 'lib', 'intel64')
elif sys.platform == 'darwin':
IS_MAC = True
lib_dir = jp(dal_root, 'lib')
elif sys.platform in ['win32', 'cygwin']:
IS_WIN = True
lib_dir = jp(dal_root, 'lib', 'intel64')
else:
assert False, sys.platform + ' not supported'
def get_lib_suffix():
def walk_ld_library_path():
if IS_WIN:
ld_library_path = os.environ.get('LIBRARY_LIB')
if ld_library_path is None:
ld_library_path = f"{os.environ.get('CONDA_PREFIX')}/Library/lib"
else:
ld_library_path = os.environ.get('LD_LIBRARY_PATH', None)
if ld_library_path is None:
return None
libs = []
if IS_WIN:
ld_library_path = ld_library_path.split(';')
else:
ld_library_path = ld_library_path.split(':')
while '' in ld_library_path:
ld_library_path.remove('')
for lib_path in ld_library_path:
for _, _, new_files in os.walk(lib_path):
libs += new_files
for lib in libs:
if 'onedal_core' in lib:
return 'onedal'
if 'daal_core' in lib:
return 'daal'
return None
def walk_libdir():
global lib_dir
for _, _, libs in os.walk(lib_dir):
for lib in libs:
if 'onedal_core' in lib:
return 'onedal'
if 'daal_core' in lib:
return 'daal'
return None
ld_lib_path_suffix = walk_ld_library_path()
lib_dir_suffix = walk_libdir()
if find_library('onedal_core') is not None or \
ld_lib_path_suffix == 'onedal' or \
lib_dir_suffix == 'onedal':
return 'onedal'
if find_library('daal_core') is not None or \
ld_lib_path_suffix == 'daal' or \
lib_dir_suffix == 'daal':
return 'daal'
raise ImportError('Unable to import oneDAL or oneDAL lib')
def get_win_major_version():
lib_name = find_library('onedal_core')
if lib_name is None:
return ''
version = lib_name.split('\\')[-1].split('.')[1]
try:
version = '.' + str(int(version))
except ValueError:
version = ''
return version
d4p_version = (os.environ['DAAL4PY_VERSION'] if 'DAAL4PY_VERSION' in os.environ
else time.strftime('2021.%Y%m%d.%H%M%S'))
trues = ['true', 'True', 'TRUE', '1', 't', 'T', 'y', 'Y', 'Yes', 'yes', 'YES']
no_dist = True if 'NO_DIST' in os.environ and os.environ['NO_DIST'] in trues else False
if not no_dist and sys.version_info <= (3, 6):
print('distributed mode not supported for python version < 3.6\n')
no_dist = True
no_stream = 'NO_STREAM' in os.environ and os.environ['NO_STREAM'] in trues
mpi_root = None if no_dist else os.environ['MPIROOT']
dpcpp = True if 'DPCPPROOT' in os.environ else False
dpcpp_root = None if not dpcpp else os.environ['DPCPPROOT']
dpctl = True if dpcpp and 'DPCTLROOT' in os.environ else False
dpctl_root = None if not dpctl else os.environ['DPCTLROOT']
#itac_root = os.environ['VT_ROOT']
IS_WIN = False
IS_MAC = False
IS_LIN = False
if 'linux' in sys.platform:
IS_LIN = True
lib_dir = jp(dal_root, 'lib', 'intel64')
elif sys.platform == 'darwin':
IS_MAC = True
lib_dir = jp(dal_root, 'lib')
elif sys.platform in ['win32', 'cygwin']:
IS_WIN = True
lib_dir = jp(dal_root, 'lib', 'intel64')
else:
assert False, sys.platform + ' not supported'
daal_lib_dir = lib_dir if (IS_MAC or os.path.isdir(lib_dir)) else os.path.dirname(lib_dir)
DAAL_LIBDIRS = [daal_lib_dir]
if IS_WIN:
DAAL_LIBDIRS.append(f"{os.environ.get('CONDA_PREFIX')}/Library/lib")
if no_stream:
print('\nDisabling support for streaming mode\n')
if no_dist:
print('\nDisabling support for distributed mode\n')
DIST_CFLAGS = []
DIST_CPPS = []
MPI_INCDIRS = []
MPI_LIBDIRS = []
MPI_LIBS = []
MPI_CPPS = []
else:
DIST_CFLAGS = ['-D_DIST_', ]
DIST_CPPS = ['src/transceiver.cpp']
MPI_INCDIRS = [jp(mpi_root, 'include')]
MPI_LIBDIRS = [jp(mpi_root, 'lib')]
MPI_LIBNAME = getattr(os.environ, 'MPI_LIBNAME', None)
if MPI_LIBNAME:
MPI_LIBS = [MPI_LIBNAME]
elif IS_WIN:
if os.path.isfile(jp(mpi_root, 'lib', 'mpi.lib')):
MPI_LIBS = ['mpi']
if os.path.isfile(jp(mpi_root, 'lib', 'impi.lib')):
MPI_LIBS = ['impi']
assert MPI_LIBS, "Couldn't find MPI library"
else:
MPI_LIBS = ['mpi']
MPI_CPPS = ['src/mpi/mpi_transceiver.cpp']
#Level Zero workaround for oneDAL Beta06
from generator.parse import parse_version
header_path = os.path.join(dal_root, 'include', 'services', 'library_version_info.h')
with open(header_path) as header:
v = parse_version(header)
dal_build_version = (int(v[0]), int(v[1]), int(v[2]), str(v[3]))
if dpcpp:
DPCPP_CFLAGS = ['-D_DPCPP_ -fno-builtin-memset']
DPCPP_LIBS = ['OpenCL', 'sycl', 'onedal_sycl']
if IS_LIN:
DPCPP_LIBDIRS = [jp(dpcpp_root, 'linux', 'lib')]
elif IS_WIN:
DPCPP_LIBDIRS = [jp(dpcpp_root, 'windows', 'lib')]
if dpctl:
# if custom dpctl library directory is specified
if 'DPCTL_LIBPATH' in os.environ:
DPCTL_LIBDIRS = [os.environ['DPCTL_LIBPATH']]
else:
DPCTL_LIBDIRS = [jp(dpctl_root, 'lib')]
DPCTL_INCDIRS = [jp(dpctl_root, 'include')]
DPCTL_LIBS = ['DPPLSyclInterface']
else:
DPCTL_INCDIRS = []
DPCTL_LIBDIRS = []
DPCTL_LIBS = []
else:
DPCPP_CFLAGS = []
DPCPP_LIBS = []
DPCPP_LIBDIRS = []
DAAL_DEFAULT_TYPE = 'double'
def get_sdl_cflags():
if IS_LIN or IS_MAC:
return DIST_CFLAGS + DPCPP_CFLAGS + ['-fstack-protector-strong', '-fPIC',
'-D_FORTIFY_SOURCE=2', '-Wformat',
'-Wformat-security', '-fno-strict-overflow',
'-fno-delete-null-pointer-checks']
elif IS_WIN:
return DIST_CFLAGS + DPCPP_CFLAGS + ['-GS', ]
def get_sdl_ldflags():
if IS_LIN:
return ['-Wl,-z,noexecstack,-z,relro,-z,now,-fstack-protector-strong,'
'-fno-strict-overflow,-fno-delete-null-pointer-checks,-fwrapv']
elif IS_MAC:
return ['-fstack-protector-strong',
'-fno-strict-overflow',
'-fno-delete-null-pointer-checks',
'-fwrapv']
elif IS_WIN:
return ['-NXCompat', '-DynamicBase']
def get_type_defines():
daal_type_defines = ['DAAL_ALGORITHM_FP_TYPE',
'DAAL_SUMMARY_STATISTICS_TYPE',
'DAAL_DATA_TYPE']
return ["-D{}={}".format(d, DAAL_DEFAULT_TYPE) for d in daal_type_defines]
def getpyexts():
include_dir_plat = [os.path.abspath('./src'), dal_root + '/include', ]
# FIXME it is a wrong place for this dependency
if not no_dist:
include_dir_plat.append(mpi_root + '/include')
using_intel = os.environ.get('cc', '') in ['icc', 'icpc', 'icl', 'dpcpp']
eca = ['-DPY_ARRAY_UNIQUE_SYMBOL=daal4py_array_API',
'-DD4P_VERSION="' + d4p_version + '"',
'-DNPY_ALLOW_THREADS=1'] + get_type_defines()
ela = []
if using_intel and IS_WIN:
include_dir_plat.append(jp(os.environ.get('ICPP_COMPILER16', ''),
'compiler',
'include'))
eca += ['-std=c++11', '-w', '/MD']
elif not using_intel and IS_WIN:
eca += ['-wd4267', '-wd4244', '-wd4101', '-wd4996', '/MD']
else:
eca += ['-std=c++11', '-w', ] # '-D_GLIBCXX_USE_CXX11_ABI=0']
# Security flags
eca += get_sdl_cflags()
ela += get_sdl_ldflags()
lib_suffix = get_lib_suffix()
if IS_WIN:
major_version = get_win_major_version()
libraries_plat = [f'{lib_suffix}_core_dll{major_version}']
else:
libraries_plat = [f'{lib_suffix}_core', f'{lib_suffix}_thread']
if IS_MAC:
ela.append('-stdlib=libc++')
ela.append("-Wl,-rpath,{}".format(daal_lib_dir))
elif IS_WIN:
ela.append('-IGNORE:4197')
elif IS_LIN and not any(x in os.environ and '-g' in os.environ[x]
for x in ['CPPFLAGS', 'CFLAGS', 'LDFLAGS']):
ela.append('-s')
exts = cythonize([Extension('_daal4py',
[os.path.abspath('src/daal4py.cpp'),
os.path.abspath('build/daal4py_cpp.cpp'),
os.path.abspath('build/daal4py_cy.pyx')] + DIST_CPPS,
depends=glob.glob(jp(os.path.abspath('src'), '*.h')),
include_dirs=include_dir_plat + [np.get_include()],
extra_compile_args=eca,
extra_link_args=ela,
libraries=libraries_plat,
library_dirs=DAAL_LIBDIRS,
language='c++'),
])
eca_dpcpp = eca.copy()
if dpcpp:
ext = Extension('_oneapi',
[os.path.abspath('src/oneapi/oneapi.pyx'), ],
depends=['src/oneapi/oneapi.h', ],
include_dirs=include_dir_plat + [np.get_include()],
extra_compile_args=eca_dpcpp,
extra_link_args=ela,
libraries=libraries_plat + DPCPP_LIBS,
library_dirs=DAAL_LIBDIRS + DPCPP_LIBDIRS,
language='c++')
exts.extend(cythonize(ext))
if dpctl:
ext = Extension('_dpctl_interop',
[
os.path.abspath('src/dpctl_interop/dpctl_interop.pyx'),
os.path.abspath('src/dpctl_interop/daal_context_service.cpp'),
],
depends=['src/dpctl_interop/daal_context_service.h', ],
include_dirs=include_dir_plat + DPCTL_INCDIRS,
extra_compile_args=eca_dpcpp,
extra_link_args=ela,
libraries=libraries_plat + DPCPP_LIBS + DPCTL_LIBS,
library_dirs=DAAL_LIBDIRS + DPCPP_LIBDIRS + DPCTL_LIBDIRS,
language='c++')
exts.extend(cythonize(ext))
if not no_dist:
ext = Extension('mpi_transceiver',
MPI_CPPS,
depends=glob.glob(jp(os.path.abspath('src'), '*.h')),
include_dirs=include_dir_plat + [np.get_include()] + MPI_INCDIRS,
extra_compile_args=eca,
extra_link_args=ela + ["-Wl,-rpath,{}".format(x)
for x in MPI_LIBDIRS],
libraries=libraries_plat + MPI_LIBS,
library_dirs=DAAL_LIBDIRS + MPI_LIBDIRS,
language='c++')
exts.append(ext)
return exts
cfg_vars = get_config_vars()
for key, value in get_config_vars().items():
if isinstance(value, str):
cfg_vars[key] = value.replace("-Wstrict-prototypes", "").replace('-DNDEBUG', '')
def gen_pyx(odir):
gtr_files = glob.glob(jp(os.path.abspath('generator'), '*')) + ['./setup.py']
src_files = [os.path.abspath('build/daal4py_cpp.h'),
os.path.abspath('build/daal4py_cpp.cpp'),
os.path.abspath('build/daal4py_cy.pyx')]
if all(os.path.isfile(x) for x in src_files):
src_files.sort(key=lambda x: os.path.getmtime(x))
gtr_files.sort(key=lambda x: os.path.getmtime(x), reverse=True)
if os.path.getmtime(src_files[0]) > os.path.getmtime(gtr_files[0]):
print('Generated files are all newer than generator code.'
'Skipping code generation')
return
from generator.gen_daal4py import gen_daal4py
odir = os.path.abspath(odir)
if not os.path.isdir(odir):
os.mkdir(odir)
gen_daal4py(dal_root, odir, d4p_version, no_dist=no_dist, no_stream=no_stream)
gen_pyx(os.path.abspath('./build'))
project_urls = {
'Bug Tracker': 'https://github.com/IntelPython/daal4py/issues',
'Documentation': 'https://intelpython.github.io/daal4py/',
'Source Code': 'https://github.com/IntelPython/daal4py'
}
# daal setup
setup(name="daal4py",
description="A convenient Python API to Intel(R) oneAPI Data Analytics Library",
author="Intel",
version=d4p_version,
url='https://github.com/IntelPython/daal4py',
project_urls=project_urls,
classifiers=[
'Development Status :: 5 - Production/Stable',
'Environment :: Console',
'Intended Audience :: Developers',
'Intended Audience :: Other Audience',
'Intended Audience :: Science/Research',
'License :: OSI Approved :: Apache Software License',
'Operating System :: MacOS :: MacOS X',
'Operating System :: Microsoft :: Windows',
'Operating System :: POSIX :: Linux',
'Programming Language :: Python :: 3',
'Topic :: Scientific/Engineering',
'Topic :: System',
'Topic :: Software Development',
],
setup_requires=['numpy>=1.14', 'cython', 'jinja2'],
install_requires=['numpy>=1.14', 'daal', 'dpcpp_cpp_rt'],
packages=['daal4py',
'daal4py.oneapi',
'daal4py.sklearn',
'daal4py.sklearn.cluster',
'daal4py.sklearn.decomposition',
'daal4py.sklearn.ensemble',
'daal4py.sklearn.linear_model',
'daal4py.sklearn.manifold',
'daal4py.sklearn.metrics',
'daal4py.sklearn.neighbors',
'daal4py.sklearn.monkeypatch',
'daal4py.sklearn.svm',
'daal4py.sklearn.utils',
'daal4py.sklearn.model_selection',
],
ext_modules=getpyexts()
)